Changesets: Import 2017-06-07 23:51:09
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master 931725ee 2015-05-28 16:46:59 Details Diff |
ENH: Editor - Ensure a related merge volume is selected after a structure delete ENH: Editor - Add function to select a structure in the structuresView and call it when deleting and adding structures ENH: Editor - Select the 'next' structure in list instead of 0th on delete From: Robin Weiss <robinweiss@uchicago.edu> git-svn-id: http://svn.slicer.org/Slicer4/trunk@24279 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/EditorLib/HelperBox.py | Diff File | ||
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master 3f8b9569 2015-05-28 16:38:58 naucoin Details Diff |
BUG: use ruler end point scale and opacity The ruler displayble manager wasn't adjusting the scale and opacity of the ruler end points, this change applies the point display node glyph scale and opacity settings to the end point handles. Issue 0003195 git-svn-id: http://svn.slicer.org/Slicer4/trunk@24278 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Annotations/MRMLDM/vtkMRMLAnnotationRulerDisplayableManager.cxx | Diff File | ||
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master 3bfa2fc2 2015-05-27 17:14:26 Details Diff |
BUG: Better solution for previous quick fix for DICOM exportables Instead of setting the slicer application as parent for exportables, they are handled in the same block where they are read out, and the export dialog itself is set as parent, so the exportables are destroyed when the export dialog is closed. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24277 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DICOMLib/Widgets/qSlicerDICOMExportDialog.cxx | Diff File | ||
| mod - Modules/Scripted/DICOMPlugins/DICOMScalarVolumePlugin.py | Diff File | ||
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master 03dcf6bc 2015-05-27 10:13:53 Details Diff |
BUG: Instantiate DICOM exportables with a parent to avoid deconstruction The crash was in DICOM export, at the following line: https://github.com/Slicer/Slicer/blob/master/Modules/Scripted/DICOMLib/Widgets/qSlicerDICOMExportDialog.cxx#L263 Also if there was no crash (sometimes it happened), the exportables were the same in the list (i.e. the same series is displayed 3 times instead of showing the 3 series in the study). The issue was most probably that the exportable objects get deconstructed during passing from python to C++. I downloaded a nightly just before this commit https://github.com/Slicer/Slicer/commit/9b7171d097ad0cfa1fe89780a2ef0758cf2ae80e and indeed, the crash was not there, the exportables showed up correctly. This commit fixes the issue, but may not be the best solution overall. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24276 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DICOMPlugins/DICOMScalarVolumePlugin.py | Diff File | ||
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master c441ba64 2015-05-26 16:51:38 Details Diff |
BUG: 0003994 fix issue switching between master volumes Since subject hierarchy nodes have the same names, we filter for volume nodes. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24275 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/EditorLib/HelperBox.py | Diff File | ||
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master 86140599 2015-05-26 16:51:37 Details Diff |
ENH: only update Bg and Lb layers when switching editor volumes Suggested and tested by Andrew Yung git-svn-id: http://svn.slicer.org/Slicer4/trunk@24274 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/EditorLib/EditUtil.py | Diff File | ||
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master a9cbfd17 2015-05-26 11:23:27 Details Diff |
BUG: 3857. Added support for Parallel and Perpendicular Diffusivity. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24273 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/vtkTeem/vtkPolyDataTensorToColor.cxx | Diff File | ||
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master c560f575 2015-05-21 12:30:05 Details Diff |
BUG: 0003993 fix update of render window when transform changes Full credit to Andras Lasso for debugging this at the VTK level! Issue is described on the bug report: http://na-mic.org/Mantis/view.php?id=3993 git-svn-id: http://svn.slicer.org/Slicer4/trunk@24272 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_VTKv6.cmake | Diff File | ||
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master 708a6f81 2015-05-21 11:37:31 Details Diff |
ENH: 0003996 accept broader range of DICOM transfers Adds flag to "accept all supported transfer syntaxes other network options" to storescp. Thanks to mcgee23 for the suggestion! git-svn-id: http://svn.slicer.org/Slicer4/trunk@24271 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DICOMLib/DICOMProcesses.py | Diff File | ||
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master 32d8d12a 2015-05-20 14:19:15 Details Diff |
BUG: Fixed application information logging displayApplicationInformations() was called in qSlicerApplication before initializing the logging. Therefore the application information (that is essential for troubleshooting) was not included in the application log. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24270 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Base/QTGUI/qSlicerApplication.cxx | Diff File | ||
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master 5cbd16be 2015-05-20 12:19:57 Details Diff |
BUG: added VTK libraries missing from the package git-svn-id: http://svn.slicer.org/Slicer4/trunk@24269 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
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master 65cfea39 2015-05-20 10:41:03 Details Diff |
BUG: ensure libvtkGUISupportQtOpenGL is packaged on mac The library is not packaged, and this appears to be a regression from the earlier fix here https://github.com/Slicer/Slicer/commit/17564f2aba3c59c9cc45ee6d38e321cf878caa11 git-svn-id: http://svn.slicer.org/Slicer4/trunk@24268 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
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master 497aac2d 2015-05-19 18:14:01 Details Diff |
BUG: Avoid error on shutdown When the layoutManager is destroyed check that there is a new one before trying to connect. Traceback (most recent call last): File "/Users/pieper/slicer4/latest/Slicer-superbuild/Slicer-build/lib/Slicer-4.4/qt-scripted-modules/DataProbeLib/SliceViewAnnotations.py", line 232, in onLayoutManagerDestroyed self.layoutManager.connect("destroyed()", self.onLayoutManagerDestroyed) AttributeError: 'NoneType' object has no attribute 'connect' git-svn-id: http://svn.slicer.org/Slicer4/trunk@24267 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DataProbe/DataProbeLib/SliceViewAnnotations.py | Diff File | ||
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master d7ec00d8 2015-05-19 17:55:01 Details Diff |
BUG: 0003954 fixes slicer bundle scene import/export * zip file size could not be correctly passed, so now there is an alternate encoding (hack) that works well. * missing storage nodes prevented correct export * export widget embedded python code had a missing import of DICOMLib Special Thanks to Xia, Wenyao <wenyao.xia@rmp.uhn.ca> for his bug fixes! git-svn-id: http://svn.slicer.org/Slicer4/trunk@24266 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DICOMLib/DICOMExportScene.py | Diff File | ||
| mod - Modules/Scripted/DICOMLib/Widgets/qSlicerDICOMExportDialog.cxx | Diff File | ||
| mod - Modules/Scripted/DICOMPlugins/DICOMSlicerDataBundlePlugin.py | Diff File | ||
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master d376a669 2015-05-19 17:17:58 Details Diff |
STYLE: Added doxygen comments to simple markups widget header Also fixed compilation warning by removing Z order tag from ui file. From: Matthew Holden git-svn-id: http://svn.slicer.org/Slicer4/trunk@24265 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/Widgets/Resources/UI/qSlicerSimpleMarkupsWidget.ui | Diff File | ||
| mod - Modules/Loadable/Markups/Widgets/qSlicerSimpleMarkupsWidget.h | Diff File | ||
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master f92c26f2 2015-05-19 14:10:21 Details Diff |
BUG: Handle layout manager deletion in slice view annotations Fix crash when closing Slicer, or when closing an application that uses custom layout manager with slice view annotations. It was caused by using an invalid instance of the layout manager that was previously destroyed. Fixes 3995 git-svn-id: http://svn.slicer.org/Slicer4/trunk@24264 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DataProbe/DataProbeLib/SliceViewAnnotations.py | Diff File | ||
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master 59622950 2015-05-19 12:19:05 Details Diff |
ENH: Made disclaimer popup configurable Disclaimer popup is shown by default at the first startup of the application. The disclaimer text has to be configurable when custom applications are built on the Slicer platform. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24263 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Applications/SlicerApp/qSlicerAppMainWindow.cxx | Diff File | ||
| mod - CMake/vtkSlicerConfigure.h.in | Diff File | ||
| mod - CMakeLists.txt | Diff File | ||
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master 87d94126 2015-05-16 12:01:45 Details Diff |
BUG: 3983. Reverted to version 23690 that fixes the crash introduced in the JC's commits since that revision. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24262 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/TractographyInteractiveSeeding/Logic/vtkSlicerTractographyInteractiveSeedingLogic.cxx | Diff File | ||
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master 59dde26e 2015-05-15 19:12:19 Details Diff |
COMP: Update BRAINSTools to fix windows build error // ---------------------------------------------------------------- Author: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> Date: Fri May 15 19:09:32 2015 -0400 COMP: Fix windows build error related to non existing std::isnan function std::isnan has been introduced in C++11 and Visual Studio 2008 doesn't support it. // ---------------------------------------------------------------- Author: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> Date: Fri May 15 18:56:16 2015 -0400 COMP: Fix windows build error due to already defined GetBValue macro This commit applies as fix similar to InsightSoftwareConsortium/ITK@8ec410c0 It avoids the windows macro "GetBValue" to conflict with the declaration of DWIMetaDataDictionaryValidator::GetBValue() On windows, the macro is usually defined in "WinGDI.h" itself included by "Windows.h". git-svn-id: http://svn.slicer.org/Slicer4/trunk@24261 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild.cmake | Diff File | ||
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master f99c9f00 2015-05-15 15:54:58 Details Diff |
BUG: 0002267 fix symmetry of label outline thickness There was a miscalculation of the array indices that caused the lines to be wider and thicker on the left and top of a label region. From: Steve Pieper <pieper@isomics.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@24260 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Logic/vtkImageLabelOutline.cxx | Diff File | ||
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master 1b176328 2015-05-15 12:51:32 Details Diff |
ENH: Enable slice view annotations to work on external layouts Slicelets use a different layout manager than the default one in slicer.app. Option added to initialize SliceAnnotations with a different layout manager. If no layout manager is specified (no arguments for constructor), then it will use the slicer.app one as before. git-svn-id: http://svn.slicer.org/Slicer4/trunk@24259 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DataProbe/DataProbeLib/SliceViewAnnotations.py | Diff File | ||
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master ba18bbb6 2015-05-15 11:49:35 Details Diff |
ENH: Added reusable simple markups widget The simple markups widget facilitates using a markups list in external modules, e.g. slicelets or modules working with fiducials. This widget has been moved from https://github.com/SlicerIGT/SlicerIGT/tree/master/FiducialRegistrationWizard/Widgets after making minor changes. Will also add a Qt designer plugin and doxygen documentation in the header. Minor addition to DICOMWidgets, enclosing statements that tend to fail in try/except. Fixes 0003496 git-svn-id: http://svn.slicer.org/Slicer4/trunk@24258 3bd1e089-480b-0410-8dfb-8563597acbee |
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| add - Modules/Loadable/Markups/Resources/Icons/Ellipsis.png | Diff File | ||
| mod - Modules/Loadable/Markups/Resources/qSlicerMarkupsModule.qrc | Diff File | ||
| mod - Modules/Loadable/Markups/Widgets/CMakeLists.txt | Diff File | ||
| add - Modules/Loadable/Markups/Widgets/Resources/UI/qSlicerSimpleMarkupsWidget.ui | Diff File | ||
| add - Modules/Loadable/Markups/Widgets/qSlicerSimpleMarkupsWidget.cxx | Diff File | ||
| add - Modules/Loadable/Markups/Widgets/qSlicerSimpleMarkupsWidget.h | Diff File | ||
| mod - Modules/Scripted/DICOMLib/DICOMWidgets.py | Diff File | ||
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master 1e52c8fb 2015-05-14 18:46:36 Details Diff |
BUG: 0002267 - remove mask code from vtkImageLabelOutline Since vtkImageLabelOutline inherits from vtkImageNeighborhoodFilter it has a fixed size mask for defining 4-connect vs 8-connect kernels. When we tried to use bigger kernels this caused overstepping outside the mask which can lead to an access violation. From: Steve Pieper <pieper@bwh.harvard.edu> git-svn-id: http://svn.slicer.org/Slicer4/trunk@24257 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Logic/vtkImageLabelOutline.cxx | Diff File | ||
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master 92d7129b 2015-05-14 18:26:08 Details Diff |
BUG: 0002267 image label outline incorrect There was a logic error in the outline kernel calculation from a previous commit. https://github.com/Slicer/Slicer/commit/cd654faa89279694af12f5d7bbaa053281594881 From: Steve Pieper <pieper@bwh.harvard.edu> git-svn-id: http://svn.slicer.org/Slicer4/trunk@24256 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Logic/vtkImageLabelOutline.cxx | Diff File | ||
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master 580fdf3f 2015-05-14 18:26:06 Details Diff |
BUG: use file name match, not regular expression 0003994 Since mrml node names may contain characters that are meaningful in regular expressions (such as parens) use a more limited form of matching. From: Steve Pieper <pieper@bwh.harvard.edu> git-svn-id: http://svn.slicer.org/Slicer4/trunk@24255 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/EditorLib/HelperBox.py | Diff File | ||
