Changesets: Import 2017-06-07 23:51:09
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master 6690e56f 2013-11-14 21:56:47 Details Diff |
COMP: Propagate cmake variable Slicer_QTSCRIPTEDMODULES_DISABLED to the Slicer inner build configuration. It originally was a typo: eq_superbuild_extra_args instead of ep_superbuild_extra_args which was latter replaced into EXTERNAL_PROJECT_OPTIONAL_ARGS git-svn-id: http://svn.slicer.org/Slicer4/trunk@22706 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild.cmake | Diff File | ||
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master 3e374d33 2013-11-14 18:26:45 naucoin Details Diff |
STYLE: updating docs for 4.3 Added description of including fiber bundles, scroll to, and show/hide all. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22705 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Models/Documentation/Models.xml | Diff File | ||
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master 8fd51029 2013-11-14 14:12:40 Details Diff |
COMP: Revert tweak release 4.3.1-1 commit done on trunk This commit revert the previous commit r22702. This commit should be done on the Slicer-4-3-1-1 branch instead of the trunk. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22703 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
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master 17f51ad1 2013-11-14 13:26:46 Details Diff |
ENH: Slicer 4.3.1-1 git-svn-id: http://svn.slicer.org/Slicer4/trunk@22702 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
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master 43e1d624 2013-11-14 11:12:56 Details Diff |
ENH: Added test for MRML node reference serialization and parsing Issue 0003416 From: Csaba Pinter <csaba.pinter@queensu.ca> git-svn-id: http://svn.slicer.org/Slicer4/trunk@22700 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Core/Testing/vtkMRMLNodeTest1.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLNode.cxx | Diff File | ||
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master 2eac6a71 2013-11-13 17:55:42 naucoin Details Diff |
STYLE: minor edits for 4.3 documentation Fix formatting errors, attributions, phrasing. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22697 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/ACPCTransform/ACPCTransform.xml | Diff File | ||
| mod - Modules/CLI/MergeModels/MergeModels.xml | Diff File | ||
| mod - Modules/CLI/ModelMaker/ModelMaker.xml | Diff File | ||
| mod - Modules/CLI/ModelToLabelMap/ModelToLabelMap.xml | Diff File | ||
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master 95f48d89 2013-11-13 09:11:33 Details Diff |
BUG: Support vtkStringArray as model field array Closes 0003344 git-svn-id: http://svn.slicer.org/Slicer4/trunk@22695 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Models/Widgets/qMRMLModelDisplayNodeWidget.cxx | Diff File | ||
| mod - SuperBuild/External_CTK.cmake | Diff File | ||
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master 001f8e6b 2013-11-12 16:08:32 Details Diff |
BUG: avoid python attribute error on dicom context menu TODO: the elements are currently disabled since we don't have corresponding implementations for the new dicom widget. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22694 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Scripted/DICOM/DICOM.py | Diff File | ||
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master 922bb212 2013-11-11 13:04:20 Details Diff |
COMP: MultiVolumeExplorer - Anticipate logic headers reorganization. Soon, as a compilation speedup, the base class "vtkMRMLAbstractLogic" will forward declared classes in its definition file. This commit fix compilation issue that would have occurred following integration of the topic "finetjul/Slicer@vtkmrmlabstractlogic-clean-includes-trunk" Fixes 0003494 Co-authored-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> From: Andrey Fedorov <fedorov@bwh.harvard.edu> git-svn-id: http://svn.slicer.org/Slicer4/trunk@22693 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_MultiVolumeExplorer.cmake | Diff File | ||
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master 5b46fd1a 2013-11-07 11:54:34 Details Diff |
ENH: dicom header viewer added to DICOMLib using ctkDICOMObjectListWidget ENH: update DICOM module for Table View New interface to support better searching and header display. Now plugins are selectable to avoid wasting time on unneeded plugins. Plugins are now evaluated on-demand, to simplify the workflow. http://www.commontk.org/index.php/CTK-Hackfest-May-2013#DICOM_Database_and_Networking https://github.com/commontk/CTK/pull/361 ENH: update to latest CTK for header widget Also fix lingering rebase issue (stray variable). BUG: Give header popup independent geometry setting Also fix incorrect end of line character ENH: examine button diabled until needed STYLE: remove tabs in code git-svn-id: http://svn.slicer.org/Slicer4/trunk@22689 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Applications/SlicerApp/Testing/Python/JRC2013Vis.py | Diff File | ||
| mod - Applications/SlicerApp/Testing/Python/RSNA2012Vis.py | Diff File | ||
| mod - Modules/Scripted/DICOM/DICOM.py | Diff File | ||
| mod - Modules/Scripted/DICOM/DICOMLib/DICOMWidgets.py | Diff File | ||
| mod - SuperBuild/External_CTK.cmake | Diff File | ||
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master 544141a3 2013-11-07 10:33:06 Details Diff |
BUG: In Slicer session, keep track of Scene file format used to save Within a given a Slicer session, the selected Scene file format will be remembered if the scene could be successfully saved/exported. Note that the corresponding value won't be saved into the settings. See 0002948 git-svn-id: http://svn.slicer.org/Slicer4/trunk@22688 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Base/QTGUI/qSlicerSaveDataDialog.cxx | Diff File | ||
| mod - Base/QTGUI/qSlicerSaveDataDialog_p.h | Diff File | ||
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master a4f50fef 2013-11-07 10:33:04 Details Diff |
BUG: Properly support extension Revert commit r22148 that was setting the path to saved MRB as MRMLScene URL. The MRML scene URL knows remains associated with the mrml file after either a read or save to mrml, or even export (MRB, Kiwi.zip, ...) operation. To be able to properly switch between different available file formats while supporting filename containing dots. The extension of a filename needs to be removed based on a list of known extensions. For that purpose, the following two functions have been introduced: - extractKnownExtension - stripKnownExtension These functions rely on the existing IOManager function "fileWriterExtensions" able to return a list of name filters associated with either a storage node or a mrml scene. For any fileName item, in order to get the associated storage node or mrml scene, a new role named "UIDRole" has been introduced. For a given fileName item, if a nodeID is set with the "UIDRole", it is understood that it will be the nodeID of the corresponding storage node. If it is not set, it means the fileName item is associated the scene. See 0002948 git-svn-id: http://svn.slicer.org/Slicer4/trunk@22687 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Base/QTGUI/qSlicerSaveDataDialog.cxx | Diff File | ||
| mod - Base/QTGUI/qSlicerSaveDataDialog_p.h | Diff File | ||
| mod - Modules/Loadable/Data/qSlicerSceneWriter.cxx | Diff File | ||
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master d2a97a6d 2013-11-07 10:33:02 Details Diff |
STYLE: Avoid confusion creating enum for custom SaveDataDialog role. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22686 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Base/QTGUI/qSlicerSaveDataDialog.cxx | Diff File | ||
| mod - Base/QTGUI/qSlicerSaveDataDialog_p.h | Diff File | ||
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master 13099732 2013-11-06 14:56:48 Details Diff |
BUG: Fixed volume rendering presets issue (presets were not displayed) The scene model RowCache was temporarily outdated during node insertion. If the cache was accessed during node insertion, the qMRMLSceneModel::indexFromNode method indicated that the node doesn't exist yet. Fixed by adding an entry to the cache with the node-to-be-added, which results in not using the cache to determine if the node exists or not but uses the traditional way of iterating through all the items. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22685 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Widgets/qMRMLSceneModel.cxx | Diff File | ||
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master 2ef602d7 2013-11-06 14:43:35 Details Diff |
COMP: Ensure custom qt style plugins are fixed-up on MacOSX This is a follow-up of commit r22238 ensuring the style plugins are considered as candidate by the fixup script. See 0003253 Signed-off-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@22684 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMake/SlicerCPackBundleFixup.cmake.in | Diff File | ||
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master 8ecf0edf 2013-11-05 09:24:15 Details Diff |
ENH: clarify name of attribute (Markup not Seed) There are different conventions in different parts of the code, but Seed is consistently the vtk widget layer, and Markup is the Slicer nomenclature. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22683 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/MRMLDM/vtkMRMLMarkupsFiducialDisplayableManager2D.cxx | Diff File | ||
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master a2f32ab8 2013-11-05 09:24:10 Details Diff |
ENH: give Markups option to be visible only in selected views Port change from r21740 from Annotations to Markups ENH: give annotations option to be visible only in selected views This uses the same convention used in dislay nodes for other displayable managers (e.g. VolumeRendering), except that it uses the sliceNode since it is the 2D analog to the 3D view Node (at some point perhaps there should be a generic superclass). Here, since we are only using the ID string it doesn't matter what type the node it. This feature allows custom UIs, for example where some annotations only show up in one view while others show up everywher. In particular, this is helpful for annotations representing volume-specific anatomical landmark locations. git-svn-id: http://svn.slicer.org/Slicer4/trunk@21740 3bd1e089-480b-0410-8dfb-8563597acbee git-svn-id: http://svn.slicer.org/Slicer4/trunk@22682 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/MRMLDM/vtkMRMLMarkupsDisplayableManager2D.cxx | Diff File | ||
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master 5ab938ef 2013-11-04 23:48:42 Details Diff |
COMP: OpenIGTLink - Fix MacOSX build error related to missing strnlen() $ git shortlog ee594372eb8c9a25da1dbff2bd081cb70ce9554a..3ac531115f55e74265e7de7ff508312dbfb16695 Junichi Tokuda (4): BUG: Implement igtl::Strnlen() for platforms that do not have strnlen. See issue 0000025. STYLE: Increment the patch number. COMP: Fix compiler warnings for Mac OS X Mavericks. Merge pull request 0000027 from tokjun/25-missing-strnlen Co-authored-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> From: Junichi Tokuda <tokuda@bwh.harvard.edu> git-svn-id: http://svn.slicer.org/Slicer4/trunk@22681 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_OpenIGTLink.cmake | Diff File | ||
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master 9d2c53a1 2013-11-04 16:18:41 Details Diff |
COMP: vtkITK - Update GetJacobian() to make transform ITKv4 compliant This patch is necessary to compile Slicer with a system ITKv4 library. For more info see the ITKv4 migration guide. http://itk.org/migrationv4/index.php?action=artikel&cat=3&id=110&artlang=en Co-authored-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> From: Dominique Belhachemi <domibel@debian.org> git-svn-id: http://svn.slicer.org/Slicer4/trunk@22680 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/vtkITK/vtkITKBSplineTransform.cxx | Diff File | ||
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master 29a04b80 2013-11-04 16:04:45 Details Diff |
BUG: OpenIGTLink - Fixes issue 0003454 - could not receive LBMETA messages. // ------------------------- OpenIGTLink updates: Bonny Biswas (2): ENH: Added set/get methods for coordinate system in ImageMessage classes BUG: LPS coordinate system value in ImageMessage does not match protocol Isaiah Norton (2): ENH: add StringEchoServer example ENH: add PointListServer example Junichi Tokuda (41): ENH: start implementing session manager ENH: MessageHandler and SessionManager classes are implemented and now working. Template-based MessageHandler class has been removed. STYLE: adding comment in the source code for SessionManagerServer example program. ENH: implement session manager with pseudo non-blocking messaging (receive only) Merge pull request 0000003 from lchauvin/patch-1 Merge pull request 0000004 from lchauvin/patch-1 ENH: added the second argument for Process() in the message handler class to share data between the message handler class and other classes/functions outside the class. Solve conflict. ENH: Adding CapabilityMessage class ENH: Adding the capability message type and examples. ENH: Merging the fixes in the master branch to the development branch. BUG: Fixed the compile error caused by the last commit. STYLE: Merging the master repository with improved comments for Doxygen. STYLE: Merge changes in the master repository. STYLE: Merge updates in the master repository. STYLE: Merge master repository. ENH: Add igtlCreateDefaultQueryMessageClass() macro to help defining a class for query message. ENH: Create HeaderOnlyMessageBase as a base class for query message types. BUG: merge labonny's changes Merge pull request 0000013 from perim/master BUG: Fix Issue 0000014 Linker error in VS2012. STYLE: Fix wrong statement in help (coordinate -> string) Merge pull request 0000018 from ihnorton/add_pointlistserver_example ENH: Add a class for GET_STATUS message type. ENH: Add TrajectoryMessage example. ENH: Merge changes in master. STYLE: Fixed revision number COMP: Fix warning 'converting to non-pointer type int from NULL'. STYLE: Update version number. ENH: Merge github.com:tokjun/OpenIGTLink.git. BUG: Avoid * ((igtl_uint16 *) ptr) = <value> to address issue 0000020. Need testing. STYLE: Format README using Markdown STYLE: Rename README to README.md BUG: Address issue 0000021.. replace this->m_DefaultBodyType = this->DefaultBodyType() with this->m_DefaultBodyType = "" BUG: Reset changes in Example/Status/StatusClient BUG: Fixing Issue 0000020. 'signed' is explicitly specified for igtl_int8. Tested on Ubuntu + armv7l. STYLE: Use C-style comments in .c files. Merge pull request 0000022 from tokjun/master ENH: Add LBMETA message to ImageDatabaseServer example. BUG: Fixed bug in LabelMetaMessage. It could not extract owner image information from a LBMETA message. Merge pull request 0000024 from tokjun/23-LBMETA-example Laurent Chauvin (3): Modified GetMode method Add igtlMessageHandlerMacro.h to the list of files ENH: Removed the sleep Per Inge Mathisen (3): Fix wrong use of delete operator Fix wrong bitwise and operator Fix compile warnings under clang // ------------------------- OpenIGTLinkIF updates: Isaiah Norton (1): COMP: partially fix 0000009, and a leak Junichi Tokuda (3): Merge pull request 0000010 from ihnorton/issue9_partial_fix ENH: Implement LableMetaList function. This commit requires OpenIGTLink library commit 661d4bd. Merge pull request 0000012 from tokjun/0003454-lbmeta From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@22679 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_OpenIGTLink.cmake | Diff File | ||
| mod - SuperBuild/External_OpenIGTLinkIF.cmake | Diff File | ||
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master 63a1a0e6 2013-11-04 15:43:07 Details Diff |
ENH: Update VTK - Add support for color lookup table annotation. Kevin Wang (1): Update vtkScalarsToColors classes to support color lookup table annotation. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22678 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_VTK.cmake | Diff File | ||
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master 72406d08 2013-11-03 18:07:51 Details Diff |
STYLE: Simplify vtkSlicerModelsLogic code using vtkNew git-svn-id: http://svn.slicer.org/Slicer4/trunk@22677 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Models/Logic/vtkSlicerModelsLogic.cxx | Diff File | ||
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master 598f1038 2013-11-03 18:07:48 Details Diff |
STYLE: Avoid confusion renaming SceneView API: "Nodes" into "StoredScene" The following renaming have been done: - ivar Nodes -> StoredScene - method "UpdateSnapshotScene" -> "UpdateStoredScene" - method "GetNodes" -> "GetStoredScene" Also remove the unused parameter from "UpdateStoredScene" git-svn-id: http://svn.slicer.org/Slicer4/trunk@22676 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Applications/SlicerApp/Testing/Python/SlicerMRBTest.py | Diff File | ||
| mod - Base/QTGUI/qSlicerSaveDataDialog.cxx | Diff File | ||
| mod - Libs/MRML/Core/Testing/vtkMRMLSceneAddSingletonTest.cxx | Diff File | ||
| mod - Libs/MRML/Core/Testing/vtkMRMLSceneViewNodeImportSceneTest.cxx | Diff File | ||
| mod - Libs/MRML/Core/Testing/vtkMRMLSceneViewNodeStoreSceneTest.cxx | Diff File | ||
| mod - Libs/MRML/Core/Testing/vtkMRMLSceneViewNodeTest1.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLSceneViewNode.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLSceneViewNode.h | Diff File | ||
| mod - Modules/Loadable/Markups/Logic/vtkSlicerMarkupsLogic.cxx | Diff File | ||
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master f3b94810 2013-11-03 18:07:42 Details Diff |
COMP: MRML Scene ivar "ActiveScene" is not unused anymore. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22675 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Core/vtkMRMLScene.h | Diff File | ||
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master 681693d6 2013-11-03 18:07:39 Details Diff |
COMP: Remove redundant Scene methods: GetClassNameList, GetNodeClasses The method "GetNodeClassesList" fulfills the same goal. git-svn-id: http://svn.slicer.org/Slicer4/trunk@22674 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Base/Logic/Testing/volumes.tcl | Diff File | ||
| mod - Libs/MRML/Core/Testing/testVolume.tcl | Diff File | ||
| mod - Libs/MRML/Core/Testing/vtkMRMLSceneTest1.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLScene.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLScene.h | Diff File | ||
