Changesets: Slicer
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2145-support-for-installing-extension-from-file 385a6347 2013-02-12 15:53:23 Details Diff |
STYLE: Update template dashboard driver script comment to suggest using "-j -lN" As suggested in [1], using the -l flag allow to keep the machine responsive while maximizing the use of the cores when possible. [1] http://www.kitware.com/blog/home/post/434 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21692 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMake/SlicerDashboardScript.TEMPLATE.cmake | Diff File | ||
| mod - Extensions/CMake/SlicerExtensionsDashboardScript.TEMPLATE.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 36455cc3 2013-02-12 14:26:09 Details Diff |
BUG: Update CLI test driver to ensure registration of ITKv4 IO Factories See 0002813 - http://www.na-mic.org/Bug/view.php?id=2813 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21691 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Base/CLI/Testing/itkTestMain.h | Diff File | ||
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2145-support-for-installing-extension-from-file 62920033 2013-02-12 11:23:06 Details Diff |
COMP: Extension driver script now fails if vtkSlicerVersionConfigure.h does not exist. Making the script fail will minimize confusion and will give an hint to the dashboard maintainer. git-svn-id: http://svn.slicer.org/Slicer4/trunk@21690 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Extensions/CMake/SlicerExtensionsDashboardDriverScript.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 94a71c3d 2013-02-11 19:38:18 Details Diff |
COMP: Exclude Slicer test involving GPU to prevent dashboard client issue. Running GPU based tests simultaneously from multiple VM is not recommended. Time we exclude the test by updating the dashboard script, let's simply disable the test within the code base itself. This will prevent the dashboard from failing while checking that the transition to ITKv4 is working as expected. Re-enabling of GPU based tests is captured by issue 0002939 See http://www.na-mic.org/Bug/view.php?id=2939 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21689 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/VolumeRendering/Testing/CMakeLists.txt | Diff File | ||
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2145-support-for-installing-extension-from-file c4b444db 2013-02-11 17:50:21 Details Diff |
COMP: Set ITKv4 as default version. Update SimpleITK version to v0.6.1 Thanks to the work of the ITK, Slicer and DCMTK community members :), the default version of ITK built wihtin Slicer will be: ITK 4.3 based of commit c31337 (01-06-2013) Remarks ======= - While this is a major change from the developer perspective, from the user perspective, we expect the functionality to behave similarly or better. That is why we maintained the major version number to "4". - In your EXISTING build tree, consider: a) manually updating the CMake option ITK_VERSION_MAJOR from 3 to 4 b) deleting ITKv3* directories. That would help minimizing future confusion. - Extensions superbuild-ing ITKv4 SHOULD be updated. - It is known that some test are failing exclusively with ITKv4, these ones will be addressed by the respective module/code maintainers. See [1] for more details. - Test have been done to ensure the extension build system was behaving as expected when using ITKv4. That said, it is possible we experience some glitch. Make sure to report any issue so that we can solve them as soon as possible. - Issue building extension depending on DCMTK has been identified. For example, extension "houghTransformCLI" failed to build. This will be addressed as soon as possible by working with ITKv4 and DCMTK community. - Enabling SimpleITK is *NOT* enabled by default and has *NOT* been tested. That said, if you enable the option Slicer_USE_SimpleITK, the latest version of SimpleITK will be built. - On windows, if you encounter strange link/build error. Consider running the following script. We are in the process of identifying what would be the optimum build and source folder length and your help and comments are welcome. See https://github.com/jcfr/list-longest-paths#readme [1] https://docs.google.com/a/kitware.com/spreadsheet/ccc?key=0AqcFo-C6Ob4-dFJRdWw3LVN6R1VYQlotNXRVaGVVT1E#gid=0 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21688 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
| mod - SuperBuild/External_SimpleITK.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 4fe83f1d 2013-02-11 17:31:01 naucoin Details Diff |
BUG: clean up the model node logic for toggling visibility. Model slice nodes are distinguished by name rather than class, make that a more easily set string. Don't toggle annotations or fiber bundle nodes or any other sub classes of model nodes. Issue 0002576 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21687 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Logic/vtkMRMLSliceLogic.cxx | Diff File | ||
| mod - Libs/MRML/Logic/vtkMRMLSliceLogic.h | Diff File | ||
| mod - Modules/Loadable/Models/Logic/vtkSlicerModelsLogic.cxx | Diff File | ||
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2145-support-for-installing-extension-from-file 6fe971ca 2013-02-11 14:44:14 Details Diff |
COMP: Remove debug statement introduced to help resolving issue 2491 Commit r21682 changed how parameter are passed to ctest script and, base on the initial dashboard results, it most likely solved the problem. Fixes 0002491 See http://www.na-mic.org/Bug/view.php?id=2491 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21686 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Extensions/CMake/SlicerBlockBuildPackageAndUploadExtensions.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 98ec8ede 2013-02-11 14:44:12 Details Diff |
COMP: Remove code specific to CMake 2.8.7 in PackageAndUploadExtension script. Since commit r21682, CMake 2.8.9 is required to build extensions. git-svn-id: http://svn.slicer.org/Slicer4/trunk@21685 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Extensions/CMake/SlicerBlockBuildPackageAndUploadExtension.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 8e4bdfe5 2013-02-11 09:09:03 Details Diff |
COMP: Download jqplot source package from slicer.kitware.com Since github.com deprecated its download api [1], the package is now downloaded from slicer.kitware.com. [1] https://github.com/blog/1302-goodbye-uploads git-svn-id: http://svn.slicer.org/Slicer4/trunk@21684 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_jqPlot.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 45a3a5bb 2013-02-10 21:40:50 Details Diff |
STYLE: Remove extra include and properly name variables in Reformat module See 0002926 - http://www.na-mic.org/Bug/view.php?id=2926 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21683 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Reformat/qSlicerReformatModule.cxx | Diff File | ||
| mod - Modules/Loadable/Reformat/qSlicerReformatModuleWidget.cxx | Diff File | ||
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2145-support-for-installing-extension-from-file 379ce8ac 2013-02-10 21:27:57 Details Diff |
COMP: Simplify how arguments are passed to PackageAndUploadExtensions script Parameter are now written into files like: <extension-name>-test-command-args.cmake <extension-name>-upload-command-args.cmake <extension-name>-upload-only-command-args.cmake This file are then passed to the ctest using argument: -DSCRIPT_ARGS_FILE:FILEPATH=<path-to-args-file> and include within the ctest script using: include(${SCRIPT_ARGS_FILE}) This approach has the advantages of: 1) being simpler in the sens it avoids escaping arguments 2) preventing issue related to the command line length on windows by passing arguments "through a file" See 0002491 - http://www.na-mic.org/Bug/view.php?id=2491 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21682 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMake/SlicerExtensionCPack.cmake | Diff File | ||
| mod - CMakeLists.txt | Diff File | ||
| mod - Extensions/CMake/SlicerBlockBuildPackageAndUploadExtension.cmake | Diff File | ||
| mod - Extensions/CMake/SlicerBlockUploadExtension.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file c2e1ca9a 2013-02-10 18:04:40 Details Diff |
ENH: update the editor template to use (dis)connectWidgets convention This makes the template match the way the rest of the editor effects are written. Thanks Andrey for pointing this out! git-svn-id: http://svn.slicer.org/Slicer4/trunk@21681 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Extensions/Testing/EditorExtensionTemplate/EditorExtensionTemplate.py | Diff File | ||
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2145-support-for-installing-extension-from-file cb1699f6 2013-02-10 10:57:40 Details Diff |
STYLE: Cleanup vtkMRMLDisplayNode PrintSelf output git-svn-id: http://svn.slicer.org/Slicer4/trunk@21680 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Core/vtkMRMLDisplayNode.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLDisplayNode.h | Diff File | ||
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2145-support-for-installing-extension-from-file 8eed7494 2013-02-10 10:57:38 Details Diff |
BUG: Fix auto scalar range for model scalar arrays When changing the active scalar field array, the range was not updated. Note that the location where the scalar range might not be best, it probably would have to be revisited at some point. Closes 0002897 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21679 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Core/vtkMRMLModelDisplayNode.cxx | Diff File | ||
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2145-support-for-installing-extension-from-file c3e628d4 2013-02-10 00:04:48 Details Diff |
STYLE: Add doc to new Harden Transform button git-svn-id: http://svn.slicer.org/Slicer4/trunk@21678 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Transforms/Documentation/Transforms.xml | Diff File | ||
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2145-support-for-installing-extension-from-file 16195f99 2013-02-09 23:53:24 Details Diff |
ENH: Add Harden transform into Transforms module + Change "Transformed nodes" collapsible groupbox title. Closes 0002909 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21677 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Transforms/Resources/UI/qSlicerTransformsModuleWidget.ui | Diff File | ||
| mod - Modules/Loadable/Transforms/qSlicerTransformsModuleWidget.cxx | Diff File | ||
| mod - Modules/Loadable/Transforms/qSlicerTransformsModuleWidget.h | Diff File | ||
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2145-support-for-installing-extension-from-file 5695c716 2013-02-08 19:48:46 Details Diff |
ENH: disable switching to quantitative layout on entering the module; resolves 0002845 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21676 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_MultiVolumeExplorer.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 00e22939 2013-02-08 19:27:32 Details Diff |
COMP: Add debug statement helping to track problem related to issue 2491 See 0002491 - http://www.na-mic.org/Bug/view.php?id=2491 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21675 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Extensions/CMake/SlicerBlockBuildPackageAndUploadExtensions.cmake | Diff File | ||
| mod - Extensions/CMake/SlicerBlockUploadExtension.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 10e39173 2013-02-08 17:27:39 Details Diff |
COMP: Update External_SimpleITK to use "git" protocol when possible git-svn-id: http://svn.slicer.org/Slicer4/trunk@21674 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_SimpleITK.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file a811d777 2013-02-08 13:40:51 naucoin Details Diff |
BUG: fix the detection of models with extensions orig and inflated. The concatenated string list was mushing the two extensions together and they were not being detected on loading data. Issue 0002924 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21673 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Models/qSlicerModelsIO.cxx | Diff File | ||
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2145-support-for-installing-extension-from-file 0fa5f089 2013-02-08 12:38:22 Details Diff |
BUG: prevent crash reported in 0002925 - missing annotation point The fiducials did not load correctly so no coordinate exists. The underling question of why the fiducials do not correctly load from that scene is not resolved. git-svn-id: http://svn.slicer.org/Slicer4/trunk@21672 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Annotations/Logic/vtkSlicerAnnotationModuleLogic.cxx | Diff File | ||
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2145-support-for-installing-extension-from-file d5339486 2013-02-08 11:11:34 Details Diff |
COMP: On MacOSX, force bundling of ITKv3 IOReview library to ensure proper loading of extension Thanks to Csaba Pinter for testing that the patch worked as expected. See http://slicer-devel.65872.n3.nabble.com/ITK-lib-missing-from-Mac-Slicer-package-needed-for-Plastimatch-tt4027274.html git-svn-id: http://svn.slicer.org/Slicer4/trunk@21671 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Applications/SlicerApp/CMakeLists.txt | Diff File | ||
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2145-support-for-installing-extension-from-file f789e693 2013-02-07 16:39:12 naucoin Details Diff |
ENH: add buttons to show/hide all models. Issue 0002576 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21670 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Models/Logic/vtkSlicerModelsLogic.cxx | Diff File | ||
| mod - Modules/Loadable/Models/Logic/vtkSlicerModelsLogic.h | Diff File | ||
| mod - Modules/Loadable/Models/Resources/UI/qSlicerModelsModuleWidget.ui | Diff File | ||
| mod - Modules/Loadable/Models/qSlicerModelsModuleWidget.cxx | Diff File | ||
| mod - Modules/Loadable/Models/qSlicerModelsModuleWidget.h | Diff File | ||
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2145-support-for-installing-extension-from-file ff1baa17 2013-02-07 11:33:30 Details Diff |
COMP: Update "External_python_unix.cmake" to comply if changes introduced in r21667 git-svn-id: http://svn.slicer.org/Slicer4/trunk@21669 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_python_unix.cmake | Diff File | ||
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2145-support-for-installing-extension-from-file 81ca0cce 2013-02-07 11:13:07 Details Diff |
BUG: fix the self-test registration for tractography tests git-svn-id: http://svn.slicer.org/Slicer4/trunk@21668 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Applications/SlicerApp/Testing/Python/test_tractography_display.py | Diff File | ||
