Changesets: Slicer

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2145-support-for-installing-extension-from-file c9979ed8

2013-04-25 11:12:57

finetjul

Details Diff 		ENH: Add qMRMLLabelComboBox::currentColorName

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21917 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLLabelComboBox.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLLabelComboBox.h Diff File

2145-support-for-installing-extension-from-file 2a512474

2013-04-25 11:12:55

finetjul

Details Diff 		BUG: Don't make qMRMLLabelComboBox a container in Qt Designer

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21916 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/DesignerPlugins/qMRMLLabelComboBoxPlugin.cxx Diff File

2145-support-for-installing-extension-from-file 0c74fffc

2013-04-24 18:11:52

pieper

Details Diff 		BUG: fix typo and warning in diffusion tensor scalars

One of the command line argument parsing options was misspelled.

Also there was an extra SetInput that caused a warning message.

Thanks to Vadim vadmalis@gmail.com for pointing this out.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21915 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/CLI/DiffusionTensorScalarMeasurements/DiffusionTensorScalarMeasurements.cxx Diff File

2145-support-for-installing-extension-from-file 0410e935

2013-04-24 17:27:04

pieper

Details Diff 		BUG: 0003040 build DCMTK as shared libraries

This avoids issues where dcmtk code is statically linked into more
than one shared library, meaning that some static initialization
and destructor code is being invoked more than once. See the bug
report for details.

http://www.na-mic.org/Bug/view.php?id=3040

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21914 3bd1e089-480b-0410-8dfb-8563597acbee
mod - SuperBuild/External_DCMTK.cmake Diff File

2145-support-for-installing-extension-from-file ce294dc8

2013-04-24 09:45:23

sankhesh

Details Diff 		ENH: Added versioning of SetupForDevelopment script

Recording the version of the development environment will help notify the
developer to re-run the SetupForDevelopment script. This can be done when there
are changes made to the environment setup scripts or to the client-side hooks.

The SetupForDevelopment script records the version of the developer setup in the
Git config file. This version is tested against the version specified in the
SetupForDevelopment script using the pre-commit hook.

This means, if there is a change in the developer setup (hooks, etc.), the
version number in the SetupForDevelopment script should be incremented to
notify other developers that they should update their setup.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21913 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Utilities/Scripts/SetupHooks.sh Diff File
mod - Utilities/Scripts/SetupUser.sh Diff File
mod - Utilities/SetupForDevelopment.sh Diff File

2145-support-for-installing-extension-from-file bb280573

2013-04-24 09:45:21

sankhesh

Details Diff 		ENH: Added safeguard hook to tell developer to setup environment

A placeholder pre-commit hook is installed by CMake to ensure the developer sets
up the development environment before committing any changes.
Addresses issue 2834.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21912 3bd1e089-480b-0410-8dfb-8563597acbee
add - CMake/SlicerCheckSourceTree.cmake Diff File
add - CMake/pre-commit Diff File
mod - CMakeLists.txt Diff File
mod - Utilities/Scripts/SetupUser.sh Diff File

2145-support-for-installing-extension-from-file 32a9b2cc

2013-04-24 09:45:19

sankhesh

Details Diff 		ENH: Added script to setup development environment

Setup git user profile, git hooks and general git development environment with
this script.
Removed hard configuration of push URL.
Addresses issue 2834.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21911 3bd1e089-480b-0410-8dfb-8563597acbee
add - Utilities/Scripts/GitTips.sh Diff File
add - Utilities/Scripts/SetupHooks.sh Diff File
add - Utilities/Scripts/SetupUser.sh Diff File
add - Utilities/SetupForDevelopment.sh Diff File

2145-support-for-installing-extension-from-file e0623522

2013-04-23 17:34:41

pieper

Details Diff 		ENH: expose layout manager methods to python

See discussion here:
http://massmail.spl.harvard.edu/public-archives/slicer-devel/2013/012255.html

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21910 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLLayoutManager.h Diff File

2145-support-for-installing-extension-from-file 67eea8af

2013-04-23 16:45:10

alexy

Details Diff 		BUG: Fixed vtkMRMLModelSliceDisplayableManagerTest caused by commit 2907.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21909 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/DisplayableManager/vtkMRMLModelSliceDisplayableManager.cxx Diff File
mod - Libs/MRML/DisplayableManager/vtkMRMLModelSliceDisplayableManager.h Diff File

2145-support-for-installing-extension-from-file ba6e103d

2013-04-23 16:06:29

finetjul

Details Diff 		STYLE: Update Models documentation

Add documentation for ctkVTKPropertyWidget properties.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21908 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Loadable/Models/Documentation/Models.xml Diff File

2145-support-for-installing-extension-from-file 2a50bdcc

2013-04-23 15:05:29

alexy

Details Diff 		BUG: 3084. Fixed multiple usability issues in ROI selection in Tractography Display module.
1. Changing Percentage Fibers Shown does not update display
2. Percentage Fibers Shown should update on mouse release not on drag
3. The ROI selection controls should be inactive until Fiber and ROI are selected to prompt users to select
4. Better name for ROI nodes needed
5. Tube slices do not show up on the newly created Fibers

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21907 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/DisplayableManager/vtkMRMLModelSliceDisplayableManager.cxx Diff File
mod - Modules/Loadable/TractographyDisplay/MRML/vtkMRMLFiberBundleNode.cxx Diff File
mod - Modules/Loadable/TractographyDisplay/Widgets/qSlicerTractographyDisplayModuleWidget.cxx Diff File
mod - Modules/Loadable/TractographyDisplay/Widgets/qSlicerTractographyEditorROIWidget.cxx Diff File

2145-support-for-installing-extension-from-file ea67a47c

2013-04-22 16:52:09

hjohnson

Details Diff 		ENH: Reset BRAINSTools to build without the ITK_FUTURE_LEGACY_REMOVE

The inconsistent use of ITK_FUTURE_LEGACY_REMOVE was causing major runtime
errors with regards to virtual functions being located in different places
in the object files between compilation units.

This update also turns off many new tools that are not ready for
distribution with Slicer.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21906 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/CLI/CMakeLists.txt Diff File
mod - SuperBuild/External_BRAINSTools.cmake Diff File

2145-support-for-installing-extension-from-file ec898b1e

2013-04-22 11:23:33

finetjul

Details Diff 		ENH: Add vtkProperty properties to display node

Issue 0002946

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21905 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/vtkMRMLDisplayNode.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLDisplayNode.h Diff File
mod - Libs/MRML/DisplayableManager/vtkMRMLModelDisplayableManager.cxx Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLDisplayNodeWidget.ui Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLDisplayNodeWidgetEventTranslatorPlayerTest1.cxx Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLDisplayNodeWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLDisplayNodeWidgetTest1.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLDisplayNodeWidget.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLDisplayNodeWidget.h Diff File
mod - SuperBuild/External_CTK.cmake Diff File

2145-support-for-installing-extension-from-file cbcecd95

2013-04-20 18:06:25

finetjul

Details Diff 		ENH: Add drag&drop support for registered IO dialogs.

To support drag&drop, a qSlicerFileDialog derived class should reimplement:
* qSlicerFileDialog::dragEnterEvent()
* qSlicerFileDialog::dropEvent()

By default, qSlicerDataDialog supports drag&drop.

Issue 0003081

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21904 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Base/QTGUI/qSlicerDataDialog.cxx Diff File
mod - Base/QTGUI/qSlicerDataDialog.h Diff File
mod - Base/QTGUI/qSlicerDataDialog_p.h Diff File
mod - Base/QTGUI/qSlicerFileDialog.cxx Diff File
mod - Base/QTGUI/qSlicerFileDialog.h Diff File
mod - Base/QTGUI/qSlicerIOManager.cxx Diff File
mod - Base/QTGUI/qSlicerIOManager.h Diff File
mod - Base/QTGUI/qSlicerModelsDialog.h Diff File

2145-support-for-installing-extension-from-file 61dc2090

2013-04-20 18:06:15

finetjul

Details Diff 		STYLE: Reorder CLI description XML elements

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21903 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Extensions/Testing/CLIExtensionTemplate/CLIModuleTemplate/CLIModuleTemplate.xml Diff File
mod - Modules/CLI/CastScalarVolume/CastScalarVolume.xml Diff File

2145-support-for-installing-extension-from-file deb68b97

2013-04-19 18:56:32

johan.andruejol

Details Diff 		BUG: Fix lost on focus when modifying spinbox

Previously, the spinbox would lose focus when modifying the value due to
an update by the node. Using the new ctkSpinBox that actually checks
if the values are the same before updating fixes this.

See Issue 0002986

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21902 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Base/QTCLI/qSlicerCLIModuleUIHelper.cxx Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLModelInfoWidget.ui Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLScreenShotDialog.ui Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLSliceInformationWidget.ui Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLTransformSliders.ui Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLVolumeInfoWidget.ui Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLWindowLevelWidget.ui Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLDisplayNodeWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLLinearTransformSliderEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLROIWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLRangeWidgetEventTranslatorPlayerTest1.cxx Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLRangeWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLVolumeInfoWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLWindowLevelWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/qMRMLColorTableView.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLItemDelegate.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLItemDelegate.h Diff File
mod - Libs/MRML/Widgets/qMRMLRangeWidget.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLRangeWidget.h Diff File
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget_p.h Diff File
mod - Modules/Loadable/CropVolume/Resources/UI/qSlicerCropVolumeModuleWidget.ui Diff File
mod - Modules/Loadable/Measurements/Resources/UI/qSlicerMeasurementsAngleWidget.ui Diff File
mod - Modules/Loadable/Measurements/Resources/UI/qSlicerMeasurementsRulerWidget.ui Diff File
mod - Modules/Loadable/Reformat/Resources/UI/qSlicerReformatModuleWidget.ui Diff File
mod - Modules/Scripted/EditorLib/PaintEffect.py Diff File
mod - Modules/Scripted/EditorLib/WandEffect.py Diff File
mod - SuperBuild/External_CTK.cmake Diff File

2145-support-for-installing-extension-from-file 3e510578

2013-04-19 14:49:33

alexy

Details Diff 		BUG: 2970. Reverted changes to Chart colormaps.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21901 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Base/Logic/Resources/ColorFiles/DarkBrightChartColors.txt Diff File
mod - Base/Logic/Resources/ColorFiles/LightPaleChartColors.txt Diff File
mod - Base/Logic/Resources/ColorFiles/MediumChartColors.txt Diff File

2145-support-for-installing-extension-from-file 0e16b6f5

2013-04-19 14:41:57

alexy

Details Diff 		BUG: 3009. Updated vtkMRMLScalarVolumeDisplayNode visualization pipeline to fix alpha compositing problem.
See diagram in http://na-mic.org/Mantis/view.php?id=3009 for more details.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21900 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/vtkMRMLScalarVolumeDisplayNode.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLScalarVolumeDisplayNode.h Diff File

2145-support-for-installing-extension-from-file 2b5f0609

2013-04-19 11:37:30

alexy

Details Diff 		BUG: 2916. Moved vtkSlicerModelsLogicAutoRemoveTest into the data module testing directory and use a datamodule logic instead of a models logic. Removed unused AutoRemoveDisplayAndStorageNodes property of vtkSlicerModelsModuleLogic.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21899 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Loadable/Data/CMakeLists.txt Diff File
add - Modules/Loadable/Data/Testing/CMakeLists.txt Diff File
add - Modules/Loadable/Data/Testing/Cxx/CMakeLists.txt Diff File
mod - Modules/Loadable/Models/Logic/vtkSlicerModelsLogic.cxx Diff File
mod - Modules/Loadable/Models/Logic/vtkSlicerModelsLogic.h Diff File
mod - Modules/Loadable/Models/Testing/Cxx/CMakeLists.txt Diff File

2145-support-for-installing-extension-from-file d8ca78db

2013-04-19 09:52:39

alexy

Details Diff 		BUG: 3060. Made
const std::vector<vtkMRMLDisplayNode*>& vtkMRMLDisplayableNode::GetDisplayNodes();
- Obsolete
utility function that provides an unsafe API. Please use GetNumberOfDisplayNodes() and GetNthDisplayNode() instead

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21898 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/Testing/vtkMRMLDisplayableNodeTest1.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLDisplayableNode.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLDisplayableNode.h Diff File
mod - Libs/MRML/DisplayableManager/vtkMRMLModelDisplayableManager.cxx Diff File
mod - Libs/MRML/DisplayableManager/vtkMRMLModelSliceDisplayableManager.cxx Diff File
mod - Libs/MRML/DisplayableManager/vtkMRMLVolumeGlyphSliceDisplayableManager.cxx Diff File

2145-support-for-installing-extension-from-file a018e28b

2013-04-17 18:11:53

jcfr

Details Diff 		BUG: External link in extension manager now open in browser. Fixes 0003045

To determine if a link should be open in the extension manager or in an
external browser, the "host" of the clicked url and the server url are
compared.

See http://qt-project.org/doc/qt-4.8/qurl.html#setAuthority for more details.

See http://www.na-mic.org/Bug/view.php?id=3045

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21897 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Base/QTGUI/qSlicerExtensionsInstallWidget.cxx Diff File
mod - Base/QTGUI/qSlicerExtensionsInstallWidget.h Diff File

2145-support-for-installing-extension-from-file f6fc91e1

2013-04-17 16:20:53

jcfr

Details Diff 		STYLE: Change configure time message to use main application name.

If SlicerApp_APPLICATION_NAME is set to "Foo", message like the following
will be displayed instead:

-- Configuring Foo version [4.2.0-2013-04-16]
-- Configuring Foo revision [21891]
-- Configuring Foo for [linux-amd64]

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21896 3bd1e089-480b-0410-8dfb-8563597acbee
mod - CMakeLists.txt Diff File

2145-support-for-installing-extension-from-file 4cee424b

2013-04-17 16:20:52

jcfr

Details Diff 		STYLE: Display Slicer revision at configuring time. Fixes 0002020

See http://www.na-mic.org/Bug/view.php?id=2020

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21895 3bd1e089-480b-0410-8dfb-8563597acbee
mod - CMakeLists.txt Diff File

2145-support-for-installing-extension-from-file 86a86e6d

2013-04-17 15:53:36

pohl

Details Diff 		BUG: Fixed issue with SetSceneReference and bug 3067

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21894 3bd1e089-480b-0410-8dfb-8563597acbee
mod - SuperBuild/External_EMSegment.cmake Diff File

2145-support-for-installing-extension-from-file b8fdb451

2013-04-17 15:08:54

jamie.snape

Details Diff 		BUG: Fix spacing buttons in slice controller widget

Ensures automatic spacing button in slice view controller widget toggles automatic spacing on and off, and updates the icon in the widget to reflect the spacing mode. Ensures automatic spacing, manual spacing, and field of view buttons are synchronized with MRML slice nodes. Ensures automatic spacing, manual spacing, and field of view buttons for each of R, Y, G update together appropriately when linked. 0002993, in part similar to 0002676-2685.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21893 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/vtkMRMLSliceNode.h Diff File
mod - Libs/MRML/Logic/vtkMRMLSliceLinkLogic.cxx Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLSliceControllerWidget.ui Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLSliceInformationWidget.ui Diff File
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget.cxx Diff File
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