Changesets: Import 2017-06-07 23:51:09
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master a8e367c0 2015-01-07 15:44:53 Details Diff |
BUG: fixed handling null polydata, more meaningful names, and output format fixes git-svn-id: http://svn.slicer.org/Slicer4/trunk@23854 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.cxx | Diff File | ||
| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.xml | Diff File | ||
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master 3a6dd655 2015-01-07 00:24:59 Details Diff |
ENH: Update SHA tag for MultiVolumeImporter. This updates MultiVolume DICOM plugin to include FlipAngle in the list of tags to consider while parsing multi-series multi-volume. This issue prevented loading of the MGH variable FA multivolume. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23853 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild.cmake | Diff File | ||
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master 65d12f8c 2015-01-06 11:50:13 naucoin Details Diff |
BUG: update camera displayable manager test MRML file Place mode persistence was added to the interaction node in svn 23772, update the baseline MRML file for this test to comply to the current MRML scene. Fixes vtkMRMLCameraDisplayableManagerTest1 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23852 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/DisplayableManager/Testing/Data/vtkMRMLCameraDisplayableManagerTest1.mrml | Diff File | ||
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master 957050ff 2015-01-05 15:52:08 naucoin Details Diff |
BUG: fix models modules tests A lot of the Models module tests are done with minimal scenes and the selection node may be null or there are no fiber bundles are present. This fix adds some null pointer testing to get the tests to pass, fixing the problem that was introduced in svn 23788. Issue 0003678 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23851 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Models/qSlicerModelsModuleWidget.cxx | Diff File | ||
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master fb4e5a5d 2015-01-05 14:39:45 Details Diff |
BUG: Fixed typo that caused ExtensionWizard error Fixes this error: $ bin/SlicerExtensionWizard Traceback (most recent call last): File "bin/../libexec/Slicer-4.4/ExtensionWizard.py", line 10, in <module> w.execute() File "C:\Program Files\Slicer 4.4.0-2014-12-30\bin\Python\SlicerWizard\ExtensionWizard.py", line 695, in execute self._execute(args if len(args) else None) File "C:\Program Files\Slicer 4.4.0-2014-12-30\bin\Python\SlicerWizard\ExtensionWizard.py", line 602, in _execute initLogging(logging.getLogger(), args) File "C:\Program Files\Slicer 4.4.0-2014-12-30\bin\Python\SlicerWizard\Utilities.py", line 204, in initLogging logger.setLevel(logLevel) NameError: global name 'logLevel' is not defined git-svn-id: http://svn.slicer.org/Slicer4/trunk@23850 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Utilities/Scripts/SlicerWizard/Utilities.py | Diff File | ||
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master c1fba1cf 2015-01-05 13:59:09 naucoin Details Diff |
ENH: fix typo, simplify code Fixed a comment typo and simplified code in response to comments. Issue 0001898 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23849 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/qSlicerMarkupsModuleWidget.cxx | Diff File | ||
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master dffce6a5 2015-01-05 13:59:06 naucoin Details Diff |
BUG: fix coordinate display and add distance The right click menu on the Markups GUI wasn't always showing the correct coordinates as there were some assumptions about how the selected items mapped to rows. Take out the assumptions, iterate through every selected item and collect unique rows. Show the summed linear distance between selected fiducials. Issue 0001898 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23848 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/qSlicerMarkupsModuleWidget.cxx | Diff File | ||
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master cfea4add 2015-01-05 13:20:25 naucoin Details Diff |
BUG: fix markups in views test Update python self test to not use the old GetSliceNode call, updated it to use GetMRMLSliceNode as determined by svn revision 23842. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23847 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/Testing/Python/MarkupsInViewsSelfTest.py | Diff File | ||
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master 4b31c729 2014-12-30 10:44:32 Details Diff |
BUG: 3925. Added logic for propagating color and opacity to fiber hierarchies git-svn-id: http://svn.slicer.org/Slicer4/trunk@23846 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Widgets/qMRMLSceneDisplayableModel.cxx | Diff File | ||
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master bcaf8b48 2014-12-30 10:38:41 Details Diff |
BUG: 3926. Added null pointer checks into reparenting code. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23845 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Widgets/qMRMLSceneHierarchyModel.cxx | Diff File | ||
| mod - Libs/MRML/Widgets/qMRMLSceneModel.cxx | Diff File | ||
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master 7306d909 2014-12-24 13:23:19 Details Diff |
BUG: Fix python path associated with build tree launcher settings. Since python_DIR resolved to /path/to/python-install directory, the intermediate directory is not needed. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23844 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_python.cmake | Diff File | ||
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master e3fa262d 2014-12-22 20:19:42 Details Diff |
COMP: Fix wrapping of Slicer/ThreeD displayable manager factory with VTKv6 This commit fixes a regression introduced by r23838 (which was known to work with VTKv5) git-svn-id: http://svn.slicer.org/Slicer4/trunk@23843 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/DisplayableManager/vtkMRMLSliceViewDisplayableManagerFactory.h | Diff File | ||
| mod - Libs/MRML/DisplayableManager/vtkMRMLThreeDViewDisplayableManagerFactory.h | Diff File | ||
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master a08b95b6 2014-12-22 13:28:50 Details Diff |
ENH: Remove redundant markups displayable manager method This commit remove the method "GetSliceNode" and instead make use of the existing method "GetMRMLSliceNode" git-svn-id: http://svn.slicer.org/Slicer4/trunk@23842 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/Loadable/Markups/MRMLDM/vtkMRMLMarkupsDisplayableManager2D.cxx | Diff File | ||
| mod - Modules/Loadable/Markups/MRMLDM/vtkMRMLMarkupsDisplayableManager2D.h | Diff File | ||
| mod - Modules/Loadable/Markups/MRMLDM/vtkMRMLMarkupsFiducialDisplayableManager2D.cxx | Diff File | ||
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master 5bda82b9 2014-12-20 22:15:09 Details Diff |
BUG: Update CTK to fix Fix warning related to missing active camera // ---------- vtkLightBoxRendererManager - Fix warning related to missing active camera This issue was occurring after (1) adding a markup and (2) registering a custom Slicer layout having at least on Slice view. It addresses the following warning: WorldToView: no active camera, cannot compute world to view, returning 0,0,0 The "no active camera" warning/issue is also discussed in Slicer issue 0001690 but note that this commit does NOT address that problem. // ---------- $ git shortlog cb53ac3..07222d0 --no-merges Jean-Christophe Fillion-Robin (1): vtkLightBoxRendererManager - Fix warning related to missing active camera git-svn-id: http://svn.slicer.org/Slicer4/trunk@23841 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_CTK.cmake | Diff File | ||
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master 6b715e9c 2014-12-20 22:11:08 Details Diff |
BUG: Fixed crash on scene close Node pointers in the scene model can become invalid when the scene is closed. If the node is looked up by node ID and pointer is retrieved from the scene then the retrieved pointer will always be valid. The d->MRMLScene->GetNodeByID() lookup takes some extra time, but it is not very slow, because it just finds a string in a std::map<string,...>. From: Andras Lasso <lasso@queensu.ca> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23840 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/Widgets/qMRMLSceneModel.cxx | Diff File | ||
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master 2330cb00 2014-12-20 22:11:06 Details Diff |
STYLE: More explicit debug message in displayable manager group The class name of the registered displayable manager is displayed. From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23839 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/DisplayableManager/vtkMRMLDisplayableManagerGroup.cxx | Diff File | ||
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master 9f7c8ab6 2014-12-20 22:11:03 Details Diff |
ENH: Allow displayable manager to be introspected using python This is particularly useful when debugging issues. From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23838 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Libs/MRML/DisplayableManager/CMakeLists.txt | Diff File | ||
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master f733996c 2014-12-20 22:11:01 Details Diff |
ENH: Enable testing infrastructure independently of BUILD_TESTING value This is particularly useful when extensions build along Slicer using -DSlicer_EXTENSION_SOURCE_DIRS want to leverage the testing infrastructure without the overhead of running all Slicer tests. From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23837 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
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master 6e133b3d 2014-12-20 22:10:59 Details Diff |
STYLE: Document deprecated CXX_TEST_PATH CMake variable From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23836 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - CMakeLists.txt | Diff File | ||
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master 40975170 2014-12-20 17:37:58 Details Diff |
ENH: Added row or column based output format options git-svn-id: http://svn.slicer.org/Slicer4/trunk@23835 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.cxx | Diff File | ||
| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.xml | Diff File | ||
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master f5c16d10 2014-12-18 15:01:37 Details Diff |
BUG: Workaround of bug in vtkXMLPolyDataReader while reading multiple files git-svn-id: http://svn.slicer.org/Slicer4/trunk@23834 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.cxx | Diff File | ||
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master 63e1803a 2014-12-17 11:29:26 naucoin Details Diff |
COMP: fix compiler error with string vector Fix parameter mismatch in call to computeScalarMeasurements by creating an empty operations vector. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23833 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.cxx | Diff File | ||
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master 45c28d5e 2014-12-16 18:58:54 Details Diff |
ENH: Added cluster aggregation based on hierarchy to FiberTractMeasurements CLI module. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23832 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.cxx | Diff File | ||
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master a8ba636b 2014-12-16 11:01:05 Details Diff |
ENH: Added first implementation of FiberTractMeasurements CLI module. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23831 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - Modules/CLI/CMakeLists.txt | Diff File | ||
| add - Modules/CLI/FiberTractMeasurements/CMakeLists.txt | Diff File | ||
| add - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.cxx | Diff File | ||
| add - Modules/CLI/FiberTractMeasurements/FiberTractMeasurements.xml | Diff File | ||
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master 28f0c1c5 2014-12-15 19:22:43 Details Diff |
COMP: Update ITKv4 and VTKv6 to include fix for multiple call to find_package // -------------- VTKv6 changes: $ git shortlog b55dad7..ea7cdc4 --no-merges Matt McCormick (1): Reset VTK_MODULES_REQUESTED to all modules with multiple calls. // -------------- ITKv4 changes: $ git shortlog 8012adeb..f5e429a --no-merges Arnaud Gelas (1): COMP: use find_package(VTK COMPONENTS) for LevelSetsv4Visualization Bill Lorensen (2): ENH: Specify required VTK modules ENH: Modify WikiExamples remote config Cory Quammen (1): COMP: Avoid including VTK_USE_FILE within ITK Jean-Christophe Fillion-Robin (1): COMP: Wiki examples require additional vtk modules Kent Williams (1): COMP: use find_package(VTK COMPONENTS) to specify just needed VTK Components Matthew McCormick (6): COMP: Remove unused typedef's in VtkGlue. COMP: Add VTK Python module when wrapping ITKVtkGlue. COMP: Remove unused typedefs in LevelSetsv4Visualization. COMP: Add missing VTK module dependency for LevelSetsv4Visualization. BUG: Configure against VTK 5. BUG: Reset ITK_MODULES_REQUESTED to all modules with multiple calls. Michka Popoff (1): STYLE: Remove old cmake < 2.8.4 specific code git-svn-id: http://svn.slicer.org/Slicer4/trunk@23830 3bd1e089-480b-0410-8dfb-8563597acbee |
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| mod - SuperBuild/External_ITKv4.cmake | Diff File | ||
| mod - SuperBuild/External_VTKv6.cmake | Diff File | ||
