Changesets: Import 2017-06-07 23:51:09
|
master 0afe15b5 2014-06-24 11:30:06 Details Diff |
BUG: Fix VTK6 support for vtkImageIslandFilter Closes 0003746 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23367 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - SuperBuild.cmake | Diff File | ||
|
master 8404d94f 2014-06-23 13:57:45 Details Diff |
BUG: Added Test 6 to expose crash of vtkImageIslandFilter due to VTK6 transition git-svn-id: http://svn.slicer.org/Slicer4/trunk@23366 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - SuperBuild.cmake | Diff File | ||
|
master 688476cf 2014-06-23 12:36:03 Details Diff |
COMP: Remove vtkImageLabelPropagation::AllocateScalarsOutput declaration in VTKv6. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23365 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - SuperBuild.cmake | Diff File | ||
|
master 0498e9c2 2014-06-23 11:35:19 Details Diff |
BUG: Fix vtkImageLabelPropagation VTK 6 support Fixes vtkSlicerCommonInterfaceTest1 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23364 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - SuperBuild.cmake | Diff File | ||
|
master c1ce7f3d 2014-06-23 11:35:17 Details Diff |
BUG: Remove pipeline error in VTK6 with DiffusionTensorDisplayNode git-svn-id: http://svn.slicer.org/Slicer4/trunk@23363 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/MRML/Core/vtkMRMLScalarVolumeDisplayNode.cxx | Diff File | ||
|
master 33050e87 2014-06-22 22:56:51 Details Diff |
COMP: Ensure variable expected by fixup script are set. This commit fixes a regression introduced by commit r23355 moving call to find_package where they are needed. By moving the find_package call from the top-level CMakeLists.txt, variable exepcted by fixup script were not set anymore. It updates SlicerCPack to call find_package and ensure variables *_LIBRARY_DIRS expected by the fixup script are set. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23362 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - CMake/SlicerCPack.cmake | Diff File | ||
|
master 2cb719f3 2014-06-22 17:23:37 Details Diff |
BUG: Consider inner build dir when checking for max root directory length. This commit introduces the convenience CMake module "PreventDirWithTooManyChars" and update code to account for length of the inner build subdirectory. It means if the maximum length of the top-level build directory is 40, assuming the inner build directory is "Slicer-build", the check in the inner build will expect a path of length 53. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23361 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| add - CMake/PreventDirWithTooManyChars.cmake | Diff File | ||
| mod - CMakeLists.txt | Diff File | ||
|
master 114526a2 2014-06-22 17:23:35 Details Diff |
COMP: Ensure PreventDirWithSpaces CMake variables is passed to inner project. This commit ensures that spaces can be used in either source or build directory when configuring Slicer inner project. This is done by passing down the variable ${PROJECT_NAME}_SKIP_DIR_WITH_SPACES_CHECK This commit also documents and simplifies usage of "PreventDirWithSpaces" CMake module. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23360 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - CMake/PreventDirWithSpaces.cmake | Diff File | ||
| mod - CMakeLists.txt | Diff File | ||
|
master 603f5f04 2014-06-22 12:31:49 Details Diff |
BUG: Do not update scalar image pipeline if there is no input image That would generate pipeline errors with the diffusion tensor display node. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23359 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/MRML/Core/vtkMRMLScalarVolumeDisplayNode.cxx | Diff File | ||
|
master 2ad3af41 2014-06-22 11:44:02 Details Diff |
COMP: Fix "RCC No resources warning" by removing empty resource files. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23358 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Applications/SlicerApp/CMakeLists.txt | Diff File | ||
| mod - Modules/Core/CMakeLists.txt | Diff File | ||
| rm - Modules/Core/Resources/qSlicerModulesCore.qrc | Diff File | ||
| mod - Modules/Loadable/Models/Widgets/CMakeLists.txt | Diff File | ||
| rm - Modules/Loadable/Models/Widgets/Resources/qSlicerModelsModuleWidgets.qrc | Diff File | ||
| mod - Modules/Loadable/TractographyInteractiveSeeding/CMakeLists.txt | Diff File | ||
| rm - Modules/Loadable/TractographyInteractiveSeeding/Resources/qSlicerTractographyInteractiveSeedingModule.qrc | Diff File | ||
|
master c5a498e1 2014-06-22 02:38:33 Details Diff |
COMP: Fix build error related to missing curl/curl.h This commit fixes build error introduced by commit r23355 by moving the use of "curl/curl.h" into the private implementation. That way, it won't be required for user of the "vtkHTTPHandler" class to know about CURL, it will be an implementation details. Build error were occurring only windows because curl wasn't installed on the system and the header wasn't found in default location. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23357 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/RemoteIO/vtkHTTPHandler.cxx | Diff File | ||
| mod - Libs/RemoteIO/vtkHTTPHandler.h | Diff File | ||
|
master 685fea01 2014-06-21 12:20:05 Details Diff |
COMP: Find qRestAPI package only where required. This commits moved the discovery of the qRestAPI module in both QTCore library and DataStore remote module. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23356 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Base/QTCore/CMakeLists.txt | Diff File | ||
| mod - CMakeLists.txt | Diff File | ||
| mod - SuperBuild.cmake | Diff File | ||
|
master 76be4eeb 2014-06-21 12:20:03 Details Diff |
COMP: Find LibArchive/CURL/OpenIGTLink/ZLIB package where required. This commit complements commit r23350 and will help reducing the number of parameters passed to the compiler/linker. See 0003741 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23355 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Base/Logic/CMakeLists.txt | Diff File | ||
| mod - CMakeLists.txt | Diff File | ||
| mod - Libs/MRML/Logic/CMakeLists.txt | Diff File | ||
| mod - Libs/RemoteIO/CMakeLists.txt | Diff File | ||
| mod - Modules/Remote/CMakeLists.txt | Diff File | ||
|
master d57a7cc7 2014-06-21 12:19:59 Details Diff |
STYLE: FiberBundleLabelSelect - Clean up CMakeLists.txt This commit removes reference to empty variable vtkTeem_LIB_DIR, additionally vtkTeem being a target this is not needed. Change *_(BINARY|SOURCE)_DIR with their *_INCLUDE_DIRS equivalent git-svn-id: http://svn.slicer.org/Slicer4/trunk@23354 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Modules/CLI/FiberBundleLabelSelect/CMakeLists.txt | Diff File | ||
|
master 211b7e68 2014-06-20 22:17:55 Details Diff |
COMP: On MacOSX, waiting issue 0003741 is *really* solved uses VTK 5.10 It turns out that the test build I initiated managed to go way beyond the original stopping point [See r23344]. That said, there are still the same issue when building SubjectHierarchy, Annotations module ... This commits reverts back to VTK 5.10 for MacOSX. The solution gonna be to continue the work initiated in [1] and remove the top level call to "find_package()" and instead have every Slicer libraries/modules including his set of direct dependencies. [1] http://massmail.spl.harvard.edu/public-archives/slicer-devel/2014/015671.html git-svn-id: http://svn.slicer.org/Slicer4/trunk@23353 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - CMakeLists.txt | Diff File | ||
|
master dcf78181 2014-06-20 22:07:09 Details Diff |
COMP: Re-enable VTKv6 on MacOSX. Since following commit r23350, issue 0003741 is resolved, this commit re-enables VTKv6 on MacOSX. git-svn-id: http://svn.slicer.org/Slicer4/trunk@23352 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - CMakeLists.txt | Diff File | ||
|
master ac54c640 2014-06-20 21:47:41 Details Diff |
COMP: SlicerExecutionModel - Update to explicitly support ITKv4 //------------- $ git shortlog 865e2a771..ecb58ad --no-merges Jean-Christophe Fillion-Robin (1): COMP: Update GenerateCLP and ModuleDescriptionParser to use ITKv4 //------------- From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23351 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - SuperBuild/External_SlicerExecutionModel.cmake | Diff File | ||
|
master 3619c674 2014-06-20 21:47:38 Details Diff |
COMP: Specify minimum set of VTKv6 libraries. Fixes 0003741 The VTK utility: Utilities/Maintenance/WhatModulesVTK.py discovers which modules are used in a project. This patch modifies the Slicer CMakeLists.txt file to only load the vtk modules used by Slicer. This should reduce the number of libraries being linked. This commit also updates CTK project including a patch reducing the number of library associated with CTKImageProcessingITKCore library. // ---------------- $ git shortlog 48ef9aeb8..282abc7 --no-merges Jean-Christophe Fillion-Robin (1): CTKImageProcessingITKCore - With ITKv4, link only to the required libraries // ---------------- Co-authored-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com> From: Bill Lorensen <bill.lorensen@gmail.com> git-svn-id: http://svn.slicer.org/Slicer4/trunk@23350 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - CMakeLists.txt | Diff File | ||
| mod - SuperBuild/External_CTK.cmake | Diff File | ||
|
master 6d4e2968 2014-06-20 09:37:28 Details Diff |
BUG: Fixes auto level for DTI images * CalculateAutoLevel was not called in VTK 6 when the image was modified * CalculateAutoLevel was aborting with Diffusion tensor display node because the scalar image data did not have a Scalars array * Also use GetDisplayScalarRange() in qSlicerScalarVolumeDisplayWidget git-svn-id: http://svn.slicer.org/Slicer4/trunk@23349 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/MRML/Core/vtkMRMLScalarVolumeDisplayNode.cxx | Diff File | ||
| mod - Libs/MRML/Core/vtkMRMLVolumeDisplayNode.cxx | Diff File | ||
| mod - Modules/Loadable/Volumes/Widgets/qSlicerScalarVolumeDisplayWidget.cxx | Diff File | ||
|
master 2eb3938d 2014-06-20 09:37:25 Details Diff |
BUG: Fix vtkITKImageToImageFilter for VTK 6 The pipeline of filters was broken. Fixes DiffusionWeightedVolumeMaskingTest git-svn-id: http://svn.slicer.org/Slicer4/trunk@23348 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/vtkITK/vtkITKImageToImageFilter.h | Diff File | ||
|
master 94085a6e 2014-06-20 09:37:23 Details Diff |
BUG: Fix vtkTeemEstimateDiffusionTensor * The nrrd reader did not properly propagate the scalar type to the pipeline on time. * vtkTeemEstimateDiffusionTensor did not use a proper pipeline of filters for the baseline and averagedwi outputs. Fixes DWIToDTIEstimationTest and DiffusionTensorScalarMeasurementsTest git-svn-id: http://svn.slicer.org/Slicer4/trunk@23347 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/vtkTeem/vtkNRRDReader.cxx | Diff File | ||
| mod - Libs/vtkTeem/vtkNRRDWriter.cxx | Diff File | ||
| mod - Libs/vtkTeem/vtkTeemEstimateDiffusionTensor.cxx | Diff File | ||
| mod - Libs/vtkTeem/vtkTeemEstimateDiffusionTensor.h | Diff File | ||
| mod - Libs/vtkTeem/vtkTensorMask.cxx | Diff File | ||
| mod - Modules/CLI/DWIToDTIEstimation/DWIToDTIEstimation.cxx | Diff File | ||
|
master 2ca4318b 2014-06-20 09:37:20 Details Diff |
STYLE: Fix 80 char limit in vtkMRMLDiffusionTensorVolumeDisplayNode git-svn-id: http://svn.slicer.org/Slicer4/trunk@23346 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Libs/MRML/Core/vtkMRMLDiffusionTensorVolumeDisplayNode.cxx | Diff File | ||
| mod - Libs/vtkITK/vtkITKNewOtsuThresholdImageFilter.h | Diff File | ||
|
master 3887ef6e 2014-06-19 16:11:58 Details Diff |
BUG: Fixed bug with respect to Image inhomogeneity; included vtkImageLabelPropagation in SlicerCommonInterFaceTest1 so it would fail as this is also the reason for EMSegCL_Task_MRIHumanBrainFullParcellation_BRAINS_small failing git-svn-id: http://svn.slicer.org/Slicer4/trunk@23345 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - SuperBuild.cmake | Diff File | ||
|
master 2ec6b84f 2014-06-18 19:03:39 Details Diff |
COMP: On MacOSX, waiting issue 0003741 is solved uses VTK 5.10 As illustrated in the bug report [1], the maximum number of linked libraries is reached on MacOSX 10.6 (see below for an example of message) but there are no problem on MacOSX 10.8 (at least when targeting 10.9). // --------- ld: warning: duplicate dylib /path/to ... [...] ld: warning: duplicate dylib /path/to ... two level namespace mach-o files can link with at most 253 dylibs, this link would use 287 dylibs // --------- Waiting we come up with a solution or understand better the scope of the problem, this commit force the VTK version to 5.10. [1] http://na-mic.org/Mantis/view.php?id=3741 git-svn-id: http://svn.slicer.org/Slicer4/trunk@23344 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - CMakeLists.txt | Diff File | ||
|
master 9015d1db 2014-06-18 11:02:14 Details Diff |
COMP: Fix Slicer build warnings This commit addresses two types of warnings: - unused variable warnings - RCC: Warning: No resources in '/path/to/foo.qrc git-svn-id: http://svn.slicer.org/Slicer4/trunk@23343 3bd1e089-480b-0410-8dfb-8563597acbee |
||
| mod - Base/QTCLI/qSlicerCLIModule.cxx | Diff File | ||
| mod - CMake/SlicerMacroBuildModuleQtLibrary.cmake | Diff File | ||
| mod - Libs/MRML/Widgets/qMRMLSceneModel.cxx | Diff File | ||
| mod - Modules/Loadable/SubjectHierarchy/Widgets/qMRMLSceneSubjectHierarchyModel.cxx | Diff File | ||
