Changesets: Slicer

2145-support-for-installing-extension-from-file 39d967ef

2013-03-26 17:30:48

hjohnson

Details Diff
COMP: Fix pathing bug in packaging

For the preferred directory for DCMTK install packages and
DCMT_DIR are not consistent. THis patch passes the correct pathing
to the bin directory needed for packaging.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21842 3bd1e089-480b-0410-8dfb-8563597acbee
mod - CMake/SlicerBlockInstallDCMTKApps.cmake Diff File
mod - SuperBuild.cmake Diff File

2145-support-for-installing-extension-from-file 19759127

2013-03-25 20:04:02

hjohnson

Details Diff
COMP: Clean up issues with ITK/DCMTK/CTK configuration

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21841 3bd1e089-480b-0410-8dfb-8563597acbee
mod - SuperBuild/External_CTK.cmake Diff File
mod - SuperBuild/External_DCMTK.cmake Diff File
mod - SuperBuild/External_ITKv4.cmake Diff File

2145-support-for-installing-extension-from-file ab4bf68c

2013-03-25 10:58:49

pieper

Details Diff
BUG: add model slice thickness implementation for 0002267

Also enable the associated gui element.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21840 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/DisplayableManager/vtkMRMLModelSliceDisplayableManager.cxx Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLDisplayNodeWidget.ui Diff File

2145-support-for-installing-extension-from-file 2bd29bf6

2013-03-24 17:05:57

hjohnson

Details Diff
ENH: Updates for BRAINSTools and ITKv4

This is a set of updates to try to address reported
issues with 32bit windows builds related to the new
double-convert to ASCII functionality.

Worked with ITKv4 team (Bill Lorensen and Kent Williams mostly) to
add the DoubleConversion featues directly to ITKv4. This simplyfies
adding this functionality to other tools (like BRAINSTools, Slicer,
ANTs, etc..), and also provides more extensive testing of ITKv4.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21839 3bd1e089-480b-0410-8dfb-8563597acbee
mod - SuperBuild.cmake Diff File
mod - SuperBuild/External_BRAINSTools.cmake Diff File
mod - SuperBuild/External_DCMTK.cmake Diff File
rm - SuperBuild/External_DoubleConvert.cmake Diff File
mod - SuperBuild/External_ITKv4.cmake Diff File

2145-support-for-installing-extension-from-file 47ddd9ba

2013-03-23 14:30:17

alexy

Details Diff
BUG: 3028. Update UI from fg,bg volume nodes on loading a volume in qMRMLSliceControllerWidgetPrivate::updateFromMRMLScene()


git-svn-id: http://svn.slicer.org/Slicer4/trunk@21838 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget_p.h Diff File

2145-support-for-installing-extension-from-file c38b83a0

2013-03-23 13:37:21

alexy

Details Diff
BUG: 3028. Reverted previous commit since it broke Link logic.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21837 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget.cxx Diff File

2145-support-for-installing-extension-from-file bf183391

2013-03-23 11:37:45

alexy

Details Diff
BUG: 3028. Reverted previous commit since it broke Link logic.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21836 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget.cxx Diff File

2145-support-for-installing-extension-from-file f1d42a95

2013-03-23 10:48:49

alexy

Details Diff
BUG: 3028. Force volume selection callback execution on loading a volume in qMRMLSliceControllerWidgetPrivate::updateFromMRMLScene()

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21835 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLSliceControllerWidget.cxx Diff File

2145-support-for-installing-extension-from-file 65a57f8c

2013-03-22 18:55:02

naucoin

Details Diff
BUG: adding the dir in svn not working with git svn dcommit, removing it

Issue 0002919



git-svn-id: http://svn.slicer.org/Slicer4/trunk@21834 3bd1e089-480b-0410-8dfb-8563597acbee

2145-support-for-installing-extension-from-file 8f47cb25

2013-03-22 18:47:05

naucoin

Details Diff
BUG: add a dir in SVN for the git svn commit from kevin wang

Kevin is adding a scalar bar actor with extra features, it
will go in the VTKRendering subdir

Issue 0002919



git-svn-id: http://svn.slicer.org/Slicer4/trunk@21833 3bd1e089-480b-0410-8dfb-8563597acbee

2145-support-for-installing-extension-from-file d6b09116

2013-03-22 16:23:48

naucoin

Details Diff
BUG: add a way to set the slice intersection thickness

Add the SliceIntersectionThickeness property to vtkMRMLDisplayNode and test it.
Add a label and spin box to the qMRMLDisplayNodeWidget but keep it disabled for now.

Issue 0002267



git-svn-id: http://svn.slicer.org/Slicer4/trunk@21832 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/vtkMRMLCoreTestingMacros.h Diff File
mod - Libs/MRML/Core/vtkMRMLDisplayNode.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLDisplayNode.h Diff File
mod - Libs/MRML/Widgets/Resources/UI/qMRMLDisplayNodeWidget.ui Diff File
mod - Libs/MRML/Widgets/Testing/qMRMLDisplayNodeWidgetEventTranslatorPlayerTest1.xml Diff File
mod - Libs/MRML/Widgets/qMRMLDisplayNodeWidget.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLDisplayNodeWidget.h Diff File

2145-support-for-installing-extension-from-file 2ce4632a

2013-03-22 13:29:03

naucoin

Details Diff
STYLE: set the title on the loading window, replace the app name

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21831 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Base/QTGUI/qSlicerIOManager.cxx Diff File

2145-support-for-installing-extension-from-file 44ac7261

2013-03-22 10:47:03

alexy

Details Diff
BUG: 2970. Shifted LUT for label maps to start with 1 rather than 0. 0 is reserved for "no value"

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21830 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Base/Logic/Resources/ColorFiles/DarkBrightChartColors.txt Diff File
mod - Base/Logic/Resources/ColorFiles/LightPaleChartColors.txt Diff File
mod - Base/Logic/Resources/ColorFiles/MediumChartColors.txt Diff File

2145-support-for-installing-extension-from-file 6452d94b

2013-03-22 09:52:55

mccormic

Details Diff
BUG: itkImageToImageRegistrationHelper not using defaultPixelValue throughout. 3024

The defaultPixelValue was not being set on all ResampleImageFilter's.

Suggested-by: Roland Kwitt <roland.kwitt@kitware.com>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21829 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/CLI/ExpertAutomatedRegistration/ITKRegistrationHelper/itkImageToImageRegistrationHelper.txx Diff File

2145-support-for-installing-extension-from-file 8c34095a

2013-03-19 17:30:21

pieper

Details Diff
ENH: Improve efficiency of PaintOver mode in WandEffect of Editor

Use a numpy array of booleans to store the visit status for
faster lookup.
Thanks to Andras for the contribution!

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21828 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Scripted/EditorLib/WandEffect.py Diff File

2145-support-for-installing-extension-from-file 3460a0bc

2013-03-19 17:27:43

pieper

Details Diff
STYLE: change category of Performance Tests per developer discussion

Now is Testing not Developer Tools.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21827 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Scripted/PerformanceTests/PerformanceTests.py Diff File

2145-support-for-installing-extension-from-file 5e6164fb

2013-03-19 17:23:55

alexy

Details Diff
BUG: Fixed crash on save mrml due to incorrect vtkMRMLDisplayableNode::DisplayModifiedEvent


git-svn-id: http://svn.slicer.org/Slicer4/trunk@21826 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/vtkMRMLDisplayableNode.h Diff File

2145-support-for-installing-extension-from-file 419a507d

2013-03-18 16:47:52

pieper

Details Diff
COMP: include dicom query/retrieve testing tool in slicer package

The DICOM Query/Retrieve Service Class Provider (dcmqrscp in dcmtk talk)
is useful for testing dicom networking in a controlled environment.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21825 3bd1e089-480b-0410-8dfb-8563597acbee
mod - CMake/SlicerBlockInstallDCMTKApps.cmake Diff File

2145-support-for-installing-extension-from-file ec920044

2013-03-18 16:31:20

pieper

Details Diff
ENH: enable the editor cursor for the wand effect

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21824 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Scripted/EditorLib/EditBox.py Diff File

2145-support-for-installing-extension-from-file c9015ff6

2013-03-18 15:16:28

pieper

Details Diff
ENH: Add WandEffect to segmentation editor

This tool was a demonstration for creating an editor extension, but
some users found it to be a valuable addition, so Andras suggested
adding it to the core of slicer. This version exposes additional options,
such as segmenting in 3D and also using a fixed threshold for better
precision when segmenting.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21823 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Scripted/EditorLib/CMakeLists.txt Diff File
mod - Modules/Scripted/EditorLib/DrawEffect.py Diff File
mod - Modules/Scripted/EditorLib/EditBox.py Diff File
add - Modules/Scripted/EditorLib/Resources/Icons/WandEffect.png Diff File
add - Modules/Scripted/EditorLib/WandEffect.py Diff File
mod - Modules/Scripted/EditorLib/__init__.py Diff File

2145-support-for-installing-extension-from-file 2eb9a904

2013-03-18 11:46:02

naucoin

Details Diff
COMP: mark/remove unused variables, fix signed/unsigned comparisons

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21822 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Core/Testing/vtkMRMLNodeTest1.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLNode.cxx Diff File
mod - Libs/MRML/Core/vtkMRMLNodeReference.h Diff File
mod - Libs/MRML/Core/vtkMRMLStorableNode.cxx Diff File

2145-support-for-installing-extension-from-file 0f47fbf7

2013-03-17 14:42:48

pieper

Details Diff
ENH: improve QImage to vtkImageData converter

Make sure the image is in rgb or argb format before converting,
and use pointer arithmetic to speed up the converter.

Add comment that we should consider using memcpy - this significantly
speeds up the conversion, but may not be correct across platforms.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21821 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLUtils.cxx Diff File

2145-support-for-installing-extension-from-file f87b8ee0

2013-03-16 18:34:29

pieper

Details Diff
ENH: editor eyedropper, eraser toggle, and related (issue 0002928)

This adds the framework for other requested hotkeys.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21820 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Scripted/EditorLib/DrawEffect.py Diff File
mod - Modules/Scripted/EditorLib/Effect.py Diff File
mod - Modules/Scripted/EditorLib/LabelEffect.py Diff File

2145-support-for-installing-extension-from-file 0e10f473

2013-03-16 18:34:27

pieper

Details Diff
STYLE: make a comment into a docstring

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21819 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Modules/Scripted/EditorLib/Effect.py Diff File

2145-support-for-installing-extension-from-file 974f4610

2013-03-16 18:34:24

pieper

Details Diff
ENH: expose qMRMLUtils for use from python

Make it a QObject for wrapping purposes.

Also: STYLE: remove trailing whitespace

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21818 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/CMakeLists.txt Diff File
mod - Libs/MRML/Widgets/qMRMLUtils.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLUtils.h Diff File
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