Additional Information | Processing numpy-1.13.1.zip
Writing /var/folders/md/_qs78z6s0rbfsth_95t95p800000gn/T/easy_install-Y7ercH/numpy-1.13.1/setup.cfg
Running numpy-1.13.1/setup.py -q bdist_egg --dist-dir /var/folders/md/_qs78z6s0rbfsth_95t95p800000gn/T/easy_install-Y7ercH/numpy-1.13.1/egg-dist-tmp-6qNkcK
Running from numpy source directory.
/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/system_info.py:572: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
self.calc_info()
/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/system_info.py:572: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
self.calc_info()
/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/system_info.py:572: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
self.calc_info()
/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'define_macros'
warnings.warn(msg)
/var/folders/md/_qs78z6s0rbfsth_95t95p800000gn/T/easy_install-Y7ercH/numpy-1.13.1/setup.py:367: UserWarning: Unrecognized setuptools command, proceeding with generating Cython sources and expanding templates
run_build = parse_setuppy_commands()
Traceback (most recent call last):
File "setup.py", line 392, in <module>
setup_package()
File "setup.py", line 384, in setup_package
setup(metadata)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/core.py", line 169, in setup
return old_setup(new_attr)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/core.py", line 151, in setup
dist.run_commands()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/command/install.py", line 62, in run
r = self.setuptools_run()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/command/install.py", line 56, in setuptools_run
self.do_egg_install()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/install.py", line 121, in do_egg_install
cmd.run()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 411, in run
self.easy_install(spec, not self.no_deps)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 654, in easy_install
return self.install_item(None, spec, tmpdir, deps, True)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 701, in install_item
self.process_distribution(spec, dist, deps)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 746, in process_distribution
[requirement], self.local_index, self.easy_install
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/pkg_resources/init.py", line 851, in resolve
dist = best[req.key] = env.best_match(req, ws, installer)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/pkg_resources/init.py", line 1123, in best_match
return self.obtain(req, installer)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/pkg_resources/init.py", line 1135, in obtain
return installer(requirement)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 673, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 699, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 880, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 1119, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/command/easy_install.py", line 1105, in run_setup
run_setup(setup_script, args)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 258, in run_setup
raise
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/contextlib.py", line 35, in exit
self.gen.throw(type, value, traceback)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 198, in setup_context
yield
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/contextlib.py", line 35, in exit
self.gen.throw(type, value, traceback)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 169, in save_modules
saved_exc.resume()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 144, in resume
six.reraise(type, exc, self._tb)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 157, in save_modules
yield saved
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 198, in setup_context
yield
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 255, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 285, in run
return func()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 253, in runner
_execfile(setup_script, ns)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/sandbox.py", line 47, in _execfile
exec(code, globals, locals)
File "/var/folders/md/_qs78z6s0rbfsth_95t95p800000gn/T/easy_install-Y7ercH/numpy-1.13.1/setup.py", line 392, in <module>
setup_package()
File "/var/folders/md/_qs78z6s0rbfsth_95t95p800000gn/T/easy_install-Y7ercH/numpy-1.13.1/setup.py", line 384, in setup_package
setup(metadata)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/core.py", line 126, in setup
dist = setup(new_attr)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY/numpy/distutils/core.py", line 169, in setup
return old_setup(**new_attr)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/core.py", line 137, in setup
ok = dist.parse_command_line()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/dist.py", line 361, in parse_command_line
result = _Distribution.parse_command_line(self)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/dist.py", line 467, in parse_command_line
args = self._parse_command_opts(parser, args)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/site-packages/setuptools-35.0.1.post20170921-py2.7.egg/setuptools/dist.py", line 672, in _parse_command_opts
nargs = _Distribution._parse_command_opts(self, parser, args)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/distutils/dist.py", line 531, in _parse_command_opts
"command class %s must subclass Command" % cmd_class
setuptools.sandbox.UnpickleableException: DistutilsClassError('command class setuptools.command.bdist_egg.bdist_egg must subclass Command',)
CMake Error at /Users/pieper/slicer4/latest/Slicer/CMake/ExternalProjectForNonCMakeProject.cmake:76 (message):
NUMPY: Error in install step. See
/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY_install_step_output.txt
and
/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY_install_step_error.txt
Call Stack (most recent call first):
/Users/pieper/slicer4/latest/Slicer-superbuild/NUMPY_install_step.cmake:3 (ExternalProject_Execute)
make[2]: [NUMPY-prefix/src/NUMPY-stamp/NUMPY-install] Error 1
make[1]: [CMakeFiles/NUMPY.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs.... |
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