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Note the same issue prevents SimpleITK's python wrapping from building. The following build error occurred after enabling SimpleITK on a build of slicer that otherwise completed and ran.
Scanning dependencies of target SimpleITK_PYTHON
[100%] Building CXX object Wrapping/CMakeFiles/SimpleITK_PYTHON.dir/SimpleITKPYTHON_wrap.cxx.o
Linking CXX shared module ../lib/_SimpleITK.so
[100%] Built target SimpleITK_PYTHON
[ 96%] Performing install step for 'SimpleITK'
Traceback (most recent call last):
File "/Users/pieper/slicer4/latest/Slicer-superbuild/SimpleITK-build/Wrapping/PythonPackage/setup.py", line 2, in <module>
use_setuptools()
File "/Users/pieper/slicer4/latest/Slicer-superbuild/SimpleITK-build/Wrapping/PythonPackage/distribute_setup.py", line 145, in use_setuptools
return _do_download(version, download_base, to_dir, download_delay)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/SimpleITK-build/Wrapping/PythonPackage/distribute_setup.py", line 124, in _do_download
to_dir, download_delay)
File "/Users/pieper/slicer4/latest/Slicer-superbuild/SimpleITK-build/Wrapping/PythonPackage/distribute_setup.py", line 186, in download_setuptools
from urllib2 import urlopen
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/urllib2.py", line 111, in <module>
from urllib import (unwrap, unquote, splittype, splithost, quote,
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/urllib.py", line 1379, in <module>
from _scproxy import _get_proxy_settings, _get_proxies
ImportError: No module named _scproxy
[ 96%] Completed 'SimpleITK'
[ 96%] Built target SimpleITK
[ 97%] Creating directories for 'Slicer'
[ 97%] No download step for 'Slicer'
[ 97%] [ 98%] No update step for 'Slicer'
No patch step for 'Slicer'
[ 99%] Performing configure step for 'Slicer'
-- The C compiler identification is Clang 4.0.0
CMake Error at /usr/share/cmake-2.8/Modules/CMakeFindBinUtils.cmake:67 (message):
Could not find install_name_tool, please check your installation.
Call Stack (most recent call first):
/usr/share/cmake-2.8/Modules/CMakeDetermineCCompiler.cmake:165 (include)
CMakeLists.txt:10 (project)
CMake Error: Error required internal CMake variable not set, cmake may be not be built correctly.
Missing variable is:
CMAKE_C_COMPILER_ENV_VAR
CMake Error: Could not find cmake module file:/Users/pieper/slicer4/latest/Slicer-superbuild/Slicer-build/CMakeFiles/2.8.10.20130215-g57833/CMakeCCompiler.cmake
CMake Error: Error required internal CMake variable not set, cmake may be not be built correctly.
Missing variable is:
CMAKE_CXX_COMPILER_ENV_VAR
CMake Error: Could not find cmake module file:/Users/pieper/slicer4/latest/Slicer-superbuild/Slicer-build/CMakeFiles/2.8.10.20130215-g57833/CMakeCXXCompiler.cmake
-- Configuring incomplete, errors occurred!
make[2]: [Slicer-prefix/src/Slicer-stamp/Slicer-configure] Error 1
make[1]: [CMakeFiles/Slicer.dir/all] Error 2
make: *** [all] Error 2
0000006 Slicer-superbuild $ |
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Fixed in r21869
See http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=21869
BUG: Fix import of urllib MacOsx by updating CMake'ified python
Thanks to Steve Pieper for reporting the issue.
Following Slicer commit r21863 and commit r21867, CMake'ified python is
used to build Slicer. This commit update the python project so that the
python extension _scproxy is also built.
// ---------
The error being fixed was:
File "/Users/pieper/slicer4/latest/Slicer-superbuild/Slicer-build/lib/Slicer-4.2/qt-scripted-modules/SampleData.py", line 192, in downloadFile
import urllib
File "/Users/pieper/slicer4/latest/Slicer-superbuild/python-install/lib/python2.7/urllib.py", line 1379, in <module>
from _scproxy import _get_proxy_settings, _get_proxies
ImportError: No module named _scproxy
// ---------
The associated commit in CMake'ified python is:
https://github.com/davidsansome/python-cmake-buildsystem/commit/a813b59647eb40b8c6a3411eee83268ae98c9452
See http://na-mic.org/Bug/view.php?id=3052
Fixes 0003052 |
