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IDProjectCategoryView StatusDate SubmittedLast Update
0002853Slicer4Core: Base Codepublic2013-01-06 08:352018-03-02 11:07
Reporteralexy Assigned Topieper  
PrioritynormalSeveritymajorReproducibilityalways
Status closedResolutionunable to reproduce 
PlatformOSWindows 64OS Version
Product VersionSlicer 4.2.2-1 
Target VersionFixed in VersionSlicer 4.6.0 
Summary0002853: saving and loading Abdominal atlas scene does not work
Description

Loading saved Abdominal atlas scene produces different results, nothing shown in 2D view and 3D view looks different.

Note that happens before the checkout:
21563

Steps To Reproduce

Run Abdominal Atlas test.
Save scene with the data somewhere
Load the saved scene

TagsNo tags attached.

Relationships

related to 0004081 assignedjcfr Ensure reference are updated before NodeAddedEvent is invoked 

Activities

pieper

pieper

2013-04-01 05:46

administrator   ~0008268

Is this still happening in the current build? If so, can you point to the abdominal atlas data you are using?
jcfr

jcfr

2016-06-09 01:11

administrator   ~0013962

As of 25176, unable to reproduce using the following steps:

1) Start Slicer
2) Settings -> Developer -> Enable developer mode
3) Restart
4) Module -> AtlasTest
5) run "Abdominal Test"
6) Save scene specifying a new directory for both data and scene
7) Close current scene
8) Open saved scene

=> 2d and 3D view appear correct

Beside of the following warning reported when saving, look like this issue can be closed.

Warnings:

Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLColorTableNode.cxx, line 173
vtkMRMLColorTableNode (0x3d123c0): ColorTable Copy inside scene view restore: colors to restore are missing, skipping.

Restoring scene Upper IG Tract (2/6)
Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLColorTableNode.cxx, line 173
vtkMRMLColorTableNode (0x3d123c0): ColorTable Copy inside scene view restore: colors to restore are missing, skipping.

Restoring scene Urinary System (3/6)
Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLColorTableNode.cxx, line 173
vtkMRMLColorTableNode (0x3d123c0): ColorTable Copy inside scene view restore: colors to restore are missing, skipping.

Restoring scene Hepatic and Portal Circulation (4/6)
Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLColorTableNode.cxx, line 173
vtkMRMLColorTableNode (0x3d123c0): ColorTable Copy inside scene view restore: colors to restore are missing, skipping.

Restoring scene Bone Structures (5/6)
Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLColorTableNode.cxx, line 173
vtkMRMLColorTableNode (0x3d123c0): ColorTable Copy inside scene view restore: colors to restore are missing, skipping.

Restoring scene Slicer Data Bundle Scene View (6/6)
Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLColorTableNode.cxx, line 173
vtkMRMLColorTableNode (0x3d123c0): ColorTable Copy inside scene view restore: colors to restore are missing, skipping.

Test passed!
Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLLabelMapVolumeDisplayNode.cxx, line 123
vtkMRMLLabelMapVolumeDisplayNode (0x13a36cf0): vtkMRMLLabelMapVolumeDisplayNode: Warning, the color table node: vtkMRMLColorTableNodeFileAbdominalAtlasColors.ctbl can't be found

Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLLabelMapVolumeDisplayNode.cxx, line 123
vtkMRMLLabelMapVolumeDisplayNode (0x13a36cf0): vtkMRMLLabelMapVolumeDisplayNode: Warning, the color table node: vtkMRMLColorTableNodeFileAbdominalAtlasColors.ctbl can't be found

Warning: In /home/jcfr/Projects/Slicer/Libs/MRML/Core/vtkMRMLLabelMapVolumeDisplayNode.cxx, line 123
vtkMRMLLabelMapVolumeDisplayNode (0x13a36cf0): vtkMRMLLabelMapVolumeDisplayNode: Warning, the color table node: vtkMRMLColorTableNodeFileAbdominalAtlasColors.ctbl can't be found

Issue History

Date Modified Username Field Change
2013-01-06 08:35 alexy New Issue
2013-01-06 08:35 alexy Status new => assigned
2013-01-06 08:35 alexy Assigned To => pieper
2013-04-01 05:46 pieper Note Added: 0008268
2015-11-12 15:49 jcfr Relationship added related to 0004081
2016-06-09 01:11 jcfr Note Added: 0013962
2016-06-09 01:11 jcfr Status assigned => resolved
2016-06-09 01:11 jcfr Fixed in Version => Slicer 4.6.0
2016-06-09 01:11 jcfr Resolution open => unable to reproduce
2018-03-02 11:07 jcfr Status resolved => closed