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IDProjectCategoryView StatusDate SubmittedLast Update
0001621Slicer4Core: Base Codepublic2011-12-09 09:252012-08-21 09:49
Reporterfmorency Assigned Tojcfr  
PrioritynormalSeveritycrashReproducibilityalways
Status closedResolutionfixed 
Product VersionSlicer 4.0.0 
Target VersionSlicer 4.0.1Fixed in VersionSlicer 4.0.1 
Summary0001621: Cannot start the software, Linux
Description
  • Unzip the Slicer-4.0.0-linux-amd64.tar.gz archive
  • ./Slicer
  • Software crash because of incompatible Qt libraries mix

morency@morency-Precision-T1600:~/software/Slicer-4.0.0-linux-amd64$ ./Slicer
RegisterIO "qSlicerFiducialsIO"
Number of registered modules: 79
Loading module "Cameras"
Loading module "EventBroker"
Loading module "VolumeRendering"
RegisterIO "qSlicerVolumeRenderingIO"
Loading module "SceneViews"
Loading module "CropVolume"
Loading module "EMSegment"
Loading module "ViewControllers"
Loading module "Annotations"
Loading module "Models"
RegisterIO "qSlicerModelsIO"
RegisterIO "qSlicerScalarOverlayIO"
Loading module "ModuleTemplate"
Loading module "Transforms"
RegisterIO "qSlicerTransformsIO"
Loading module "Tractography"
Loading module "TractographyFiducialSeeding"
Loading module "Data"
RegisterIO "qSlicerSceneIO"
RegisterIO "qSlicerSlicer2SceneReader"
RegisterIO "qSlicerXcedeCatalogIO"
Loading module "EMSegmentQuick"
Loading module "Welcome"
Loading module "Colors"
RegisterIO "qSlicerColorsIO"
Loading module "Volumes"
RegisterIO "qSlicerVolumesIO"
Loading module "TractographyDisplay"
RegisterIO "qSlicerFiberBundleIO"
Loading module "LabelStatistics"
Loading module "PerformanceTests"
Loading module "Endoscopy"
Loading module "SampleData"
Loading module "DICOM2FullBrainTractography"
Loading module "DataProbe"
Loading module "DICOM"
Loading module "ChangeTracker"
Loading module "Editor"
Loading module "BRAINSResample"
Loading module "Mask"
Loading module "dwiNoiseFilter"
Loading module "CurvatureAnisotropicDiffusion"
Loading module "MedianImageFilter"
Loading module "ExtractSkeleton"
Loading module "CheckerBoard"
Loading module "BRAINSDemonWarp"
Loading module "MultipleModelsExample"
Loading module "ResampleDTI"
Loading module "GrayscaleFillHoleImageFilter"
Loading module "ConfidenceConnected"
Loading module "HistogramMatching"
Loading module "dwiUNLM"
Loading module "BRAINSFit"
Loading module "SparseFieldLevelSetContour"
Loading module "RobustStatSegmenter"
Loading module "VBRAINSDemonWarp"
Loading module "MergeModels"
Loading module "ModelMaker"
Loading module "DicomToNrrdConverter"
Loading module "jointLMMSE"
Loading module "VotingBinaryHoleFillingImageFilter"
Loading module "Realign"
Loading module "Threshold"
Loading module "OrientImage"
Loading module "Add"
Loading module "N4ITKBiasFieldCorrection"
Loading module "Multiply"
Loading module "LabelMapSmoothing"
Loading module "ResampleVolume2"
Loading module "GradientAnisotropicDiffusion"
Loading module "Subtract"
Loading module "ImageLabelCombine"
Loading module "Cast"
Loading module "ExecutionModelTour"
Loading module "GaussianBlurImageFilter"
Loading module "GrayscaleGrindPeakImageFilter"
Loading module "BRAINSROIAuto"
Loading module "PolyDataToLabelmap"
Loading module "ImageReadDicomWrite"
Loading module "EMSegmentTransformToNewFormat"
Loading module "DiffusionWeightedMasking"
Loading module "IntensityDifferenceMetric"
Loading module "Seeding"
Loading module "EMSegmentCommandLine"
Loading module "DiffusionTensorMathematics"
Loading module "ProbeVolumeWithModel"
Loading module "DiffusionTensorEstimation"
Loading module "ComputeSUVBodyWeight"
Loading module "GrayscaleModelMaker"
Number of loaded modules: 79
Show module (name): "Welcome"
Cannot mix incompatible Qt library (version 0x40704) with this library (version 0x40700)
error: [/home/morency/software/Slicer-4.0.0-linux-amd64/./bin/SlicerQT-real] exit abnormally - Report the problem.
morency@morency-Precision-T1600:~/software/Slicer-4.0.0-linux-amd64$

Additional Information

Ubuntu 11.10 x86_64
Qt 4.7.4 is installed on the system (default runtime and dev packages from Ubuntu repositories)

TagsNo tags attached.

Activities

finetjul

finetjul

2011-12-11 14:56

administrator   ~0003435

Last edited: 2011-12-11 14:58

I would need some help to debug it as I can't reproduce.

  • can you add a note with the content of the file SlicerLauncherSettings.ini located in ./bin ?
  • can you add a note with the result of the following action:
    $ ./Slicer --launch /usr/bin/xterm
    // In the terminal that opens, type
    $ export
    // write down the file here
  • what's the result of the following command:
    $ ./Slicer --home"
    Thanks.

2011-12-12 04:36

 

SlicerLauncherSettings.ini (1,944 bytes)

2011-12-12 04:38

 

exportResults (5,752 bytes) 



 exportResults (5,752 bytes) 
			




	




		
		
		

		

		

			 		

		

			 2011-12-12 04:41					

		

						 
					

				

		

		

				

		

			
	
	


 SlicerHome (101 bytes) 




 SlicerHome (101 bytes) 
			




	




		
		
fmorency
		

		

		

			 fmorency		

		

			 2011-12-12 04:44					

		

			reporter			 
						
			
				~0003436			
					

				

		

		

				

		

			
	
	
@finetjul

I uploaded the three reports. Feel free to ask for more feedback.
			




	




		
		
jcfr
		

		

		

			 jcfr		

		

			 2011-12-19 15:15					

		

			administrator			 
						
			
				~0003467			
					

				

		

		

				

		

			
	
	
After extracting Slicer-4.0.0-linux-amd64.tar.gz, removing libqsvg.so from lib/QtPlugins folder should allow Slicer to start properly.


The root cause of the problem has been addressed and the issue shouldn't occur in the next release of Slicer. See http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=18957
			




	
















    

        
        






	

		
		Issue History	

	

		
			
		
	











	
		

			
				Date Modified			
			
				Username			
			
				Field			
			
				Change			
		

	

	
		

			
				2011-12-09 09:25			
			
				fmorency			
			
				New Issue			
			
							
		

		

			
				2011-12-09 09:25			
			
				fmorency			
			
				Status			
			
				new => assigned			
		

		

			
				2011-12-09 09:25			
			
				fmorency			
			
				Assigned To			
			
				 => finetjul			
		

		

			
				2011-12-11 14:56			
			
				finetjul			
			
				Note Added: 0003435			
			
							
		

		

			
				2011-12-11 14:56			
			
				finetjul			
			
				Status			
			
				assigned => feedback			
		

		

			
				2011-12-11 14:58			
			
				finetjul			
			
				Note Edited: 0003435			
			
							
		

		

			
				2011-12-12 04:36			
			
				fmorency			
			
				File Added: SlicerLauncherSettings.ini			
			
							
		

		

			
				2011-12-12 04:38			
			
				fmorency			
			
				File Added: exportResults			
			
							
		

		

			
				2011-12-12 04:41			
			
				fmorency			
			
				File Added: SlicerHome			
			
							
		

		

			
				2011-12-12 04:44			
			
				fmorency			
			
				Note Added: 0003436			
			
							
		

		

			
				2011-12-19 15:15			
			
				jcfr			
			
				Status			
			
				feedback => assigned			
		

		

			
				2011-12-19 15:15			
			
				jcfr			
			
				Note Added: 0003467			
			
							
		

		

			
				2011-12-19 15:15			
			
				jcfr			
			
				Status			
			
				assigned => resolved			
		

		

			
				2011-12-19 15:15			
			
				jcfr			
			
				Fixed in Version			
			
				 => Slicer 4.0 AHM Winter 2012			
		

		

			
				2011-12-19 15:15			
			
				jcfr			
			
				Resolution			
			
				open => fixed			
		

		

			
				2011-12-19 17:08			
			
				finetjul			
			
				Assigned To			
			
				finetjul => jcfr			
		

		

			
				2012-02-06 18:05			
			
				jcfr			
			
				Status			
			
				resolved => closed			
		

		

			
				2012-08-21 09:49			
			
				jcfr			
			
				Target Version			
			
				 => Slicer 4.0.1