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IDProjectCategoryView StatusDate SubmittedLast Update
0001544Slicer4Core: Packagingpublic2011-11-12 09:142012-08-21 11:31
Reporterfedorov Assigned Tohjmjohnson  
PrioritynormalSeverityblockReproducibilityalways
Status closedResolutionfixed 
Product Version 
Target VersionSlicer 4.0.0Fixed in VersionSlicer 4.0.0 
Summary0001544: BRAINSDemonWarp is missing in Win64 packaged Slicer4
Description

Tested with Nov 12 binary available here:

http://slicer.cdash.org/viewFiles.php?buildid=4211

Additional Information

$ ls lib/Slicer-4.0/cli-modules/
Add.exe MRIBiasFieldCorrectionLib.lib
AddLib.dll Mask.exe
AddLib.lib MaskLib.dll
AffineRegistration.exe MaskLib.lib
AffineRegistrationLib.dll MedianImageFilter.exe
AffineRegistrationLib.lib MedianImageFilterLib.dll
BRAINSFit.exe MedianImageFilterLib.lib
BRAINSFitLib.dll MergeModels.exe
BRAINSFitLib.lib MergeModelsLib.dll
BRAINSROIAuto.exe MergeModelsLib.lib
BRAINSROIAutoLib.dll ModelMaker.exe
BRAINSROIAutoLib.lib ModelMakerLib.dll
BRAINSResample.exe ModelMakerLib.lib
BRAINSResampleLib.dll MultipleModelsExample.exe
BRAINSResampleLib.lib MultipleModelsExampleLib.dll
BSplineDeformableRegistration.exe MultipleModelsExampleLib.lib
BSplineDeformableRegistrationLib.dll Multiply.exe
BSplineDeformableRegistrationLib.lib MultiplyLib.dll
BSplineToDeformationField.exe MultiplyLib.lib
BSplineToDeformationFieldLib.dll N4ITKBiasFieldCorrection.exe
BSplineToDeformationFieldLib.lib N4ITKBiasFieldCorrectionLib.dll
Cast.exe N4ITKBiasFieldCorrectionLib.lib
CastLib.dll OrientImage.exe
CastLib.lib OrientImageLib.dll
CheckerBoard.exe OrientImageLib.lib
CheckerBoardLib.dll OtsuThresholdImageFilter.exe
CheckerBoardLib.lib OtsuThresholdImageFilterLib.dll
ComputeSUVBodyWeight.exe OtsuThresholdImageFilterLib.lib
ComputeSUVBodyWeightLib.dll OtsuThresholdSegmentation.exe
ComputeSUVBodyWeightLib.lib OtsuThresholdSegmentationLib.dll
ConfidenceConnected.exe OtsuThresholdSegmentationLib.lib
ConfidenceConnectedLib.dll PolyDataToLabelmap.exe
ConfidenceConnectedLib.lib PolyDataToLabelmapLib.dll
CurvatureAnisotropicDiffusion.exe PolyDataToLabelmapLib.lib
CurvatureAnisotropicDiffusionLib.dll ProbeVolumeWithModel.exe
CurvatureAnisotropicDiffusionLib.lib Realign.exe
DemonsSegmentationMetric.exe RealignLib.dll
DicomToNrrdConverter.exe RealignLib.lib
DicomToNrrdConverterLib.dll RegisterImages.exe
DiffusionTensorEstimation.exe RegisterImagesModule.dll
DiffusionTensorMathematics.exe RegisterImagesMultiRes.exe
DiffusionTensorTest.exe RegisterImagesMultiResModule.dll
DiffusionTensorTestLib.dll ResampleDTI.exe
DiffusionTensorTestLib.lib ResampleDTILib.dll
DiffusionWeightedMasking.exe ResampleDTILib.lib
EMSegmentCommandLine.exe ResampleVolume.exe
EMSegmentTransformToNewFormat.exe ResampleVolume2.exe
ExecutionModelTour.exe ResampleVolume2Lib.dll
ExecutionModelTourLib.dll ResampleVolume2Lib.lib
ExecutionModelTourLib.lib ResampleVolumeLib.dll
ExtractSkeleton.exe ResampleVolumeLib.lib
ExtractSkeletonLib.dll RigidRegistration.exe
ExtractSkeletonLib.lib RigidRegistrationLib.dll
GaussianBlurImageFilter.exe RigidRegistrationLib.lib
GaussianBlurImageFilterLib.dll RobustStatSegmenter.exe
GaussianBlurImageFilterLib.lib RobustStatSegmenterLib.dll
GradientAnisotropicDiffusion.exe RobustStatSegmenterLib.lib
GradientAnisotropicDiffusionLib.dll Seeding.exe
GradientAnisotropicDiffusionLib.lib SparseFieldLevelSetContour.exe
GrayscaleFillHoleImageFilter.exe SparseFieldLevelSetContourLib.dll
GrayscaleFillHoleImageFilterLib.dll SparseFieldLevelSetContourLib.lib
GrayscaleFillHoleImageFilterLib.lib Subtract.exe
GrayscaleGrindPeakImageFilter.exe SubtractLib.dll
GrayscaleGrindPeakImageFilterLib.dll SubtractLib.lib
GrayscaleGrindPeakImageFilterLib.lib TestGridTransformRegistration.exe
GrayscaleModelMaker.exe TestGridTransformRegistrationLib.dll
HistogramMatching.exe TestGridTransformRegistrationLib.lib
HistogramMatchingLib.dll Threshold.exe
HistogramMatchingLib.lib ThresholdLib.dll
ImageLabelCombine.exe ThresholdLib.lib
ImageLabelCombineLib.dll TransformFromFiducials.exe
ImageLabelCombineLib.lib TransformFromFiducialsModule.dll
ImageReadDicomWrite.exe VotingBinaryHoleFillingImageFilter.exe
ImageReadDicomWriteLib.dll VotingBinaryHoleFillingImageFilterLib.dll
ImageReadDicomWriteLib.lib VotingBinaryHoleFillingImageFilterLib.lib
IntensityDifferenceMetric.exe dwiNoiseFilter.exe
LabelMapSmoothing.exe dwiNoiseFilterLib.dll
LabelMapSmoothingLib.dll dwiNoiseFilterLib.lib
LabelMapSmoothingLib.lib dwiUNLM.exe
LinearRegistration.exe dwiUNLMLib.dll
LinearRegistrationLib.dll dwiUNLMLib.lib
LinearRegistrationLib.lib jointLMMSE.exe
MRIBiasFieldCorrection.exe jointLMMSELib.dll
MRIBiasFieldCorrectionLib.dll jointLMMSELib.lib

Administrator@JOE /c/Program Files (x86)/Slicer 4.0.gamma-2011-11-12
$

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Activities

hjmjohnson

hjmjohnson

2011-11-15 12:34

developer   ~0003319

commit 25d9fb76e2a919923ffc3b36ab93e8ed35f48eaf
Author: hjohnson <hjohnson@3bd1e089-480b-0410-8dfb-8563597acbee>
Date: Tue Nov 15 22:30:30 2011 +0000

ENH: Change hash to BRAINSTools with fixes.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@18692 3bd1e089-480b-0410-8dfb-8563597acbee

===========
BRAINSDemonWarp is now defaulted to ON. This should work on a clean build, but updates may require using cmake from the Slicer-build directory and changing BRAINSDemonWarp=ON.

Issue History

Date Modified Username Field Change
2011-11-12 09:14 fedorov New Issue
2011-11-12 09:14 fedorov Status new => assigned
2011-11-12 09:14 fedorov Assigned To => jcfr
2011-11-12 09:44 jcfr Assigned To jcfr => hjmjohnson
2011-11-15 12:34 hjmjohnson Note Added: 0003319
2011-11-15 12:34 hjmjohnson Status assigned => closed
2011-11-15 12:34 hjmjohnson Resolution open => fixed
2012-08-21 11:31 jcfr Fixed in Version => Slicer 4.0.0
2012-08-21 11:31 jcfr Target Version => Slicer 4.0.0