View Issue Details
ID | Project | Category | View Status | Date Submitted | Last Update |
---|---|---|---|---|---|
0004202 | Slicer4 | Module Editor | public | 2016-06-02 17:19 | 2017-06-10 17:57 |
Reporter | aszepess | Assigned To | pieper | ||
Priority | high | Severity | major | Reproducibility | always |
Status | resolved | Resolution | unable to reproduce | ||
Platform | Mac, Linux | OS | OS X, Ubuntu | OS Version | 10.10.5, 14.04 |
Product Version | Slicer 4.5.0-1 | ||||
Target Version | Fixed in Version | ||||
Summary | 0004202: SaveIslandEffect does not work in 4.4, 4.5, but works in 3.6. | ||||
Description | We have a binary image of segmentation for brain image in the NIFTI format. Our job is to remove CSF area and save the ventricles. To achieve this, we loaded the binary image as “LabelMap” and then loaded it again without “LabelMap”. Then we clicked on Editor and we used the "DrawEffect" to circle bottom portion of the brain that we wanted to get rid of. Once we did that for all the slides in the image, we switched to "SaveIslandEffect" and clicked the lateral ventricle on the image. What's supposed to happen is that everything except the ventricles are supposed to go away. However, nothing happens. The "DrawEffect" works, but the "SaveIslandEffect" does not work in version 4.4 or 4.5, but it works in version 3.6. | ||||
Steps To Reproduce |
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Additional Information | Step 7 does not work with version 4.4 or 4.5 but it works with 3.6. Attached are the example of the output of version 4.4 and version 3.6 after Step 6. The one on the left is from version 4.4 and the one on the right is version 3.6. | ||||
Tags | No tags attached. | ||||
I don't see that you've attached data to replicate the issue. You might try providing the label map where you think the island has been isolated. Here's what I did try that works correctly (and makes me believe it works the same as in 3.6)
You can try this with various tools like Threshold followed by SaveIsand it things are working as I expect. |
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Without further feedback from the reporter it is not possible to reproduce the issue. |
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Date Modified | Username | Field | Change |
---|---|---|---|
2016-06-02 17:19 | aszepess | New Issue | |
2016-06-02 17:19 | aszepess | Status | new => assigned |
2016-06-02 17:19 | aszepess | Assigned To | => pieper |
2016-06-02 17:19 | aszepess | File Added: SaveIslandEffectResults.png | |
2016-06-02 17:59 | pieper | Note Added: 0013935 | |
2016-06-02 17:59 | pieper | Status | assigned => feedback |
2017-06-10 17:57 | lassoan | Status | feedback => resolved |
2017-06-10 17:57 | lassoan | Resolution | open => unable to reproduce |
2017-06-10 17:57 | lassoan | Note Added: 0014744 |